KEGG   Rosa chinensis (China rose): 112190770
Entry
112190770         CDS       T06020                                 
Name
(RefSeq) nuclear poly(A) polymerase 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112190770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112190770
Enzymes [BR:rcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     112190770
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     112190770
SSDB
Motif
Pfam: PAP_central PAP_NTPase PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 112190770
NCBI-ProteinID: XP_024186017
Position
2:33579743..33581722
AA seq 649 aa
MKSNELERYLRNDAGLYECREESLIREEVLGRLDEIVKQWVKAISRGKGFDEEFVEEANA
KVFTFGSYRLGVHSPGADIDTLCVGPAYVTREEGFFGELYKMLSEMPEEVTELNPVHDAH
VPVLKFKFNGVSIDLVYARLSLPVIPEDLDLSQDSILQHVSAGDEQTVRSLNGCRVTDRI
LKLVPNIQTFRTTLRCIRLWAKHRGVYSNVAGFLGGINWALLVAFICQLYPNALPSLLVS
RFFRVYTQWRWPNPVLLCPIKEGLGLQVWDPRRNVRDRYHLMPIITPAYPSMNSSYNVSQ
STLCIMLGEFQRGNDICKAMEAENKDFDWGTLFESYAFFDAYKNYLQIDICAGGADDFRK
WKGWVESRIRQLTLKVENETGGMLQCHPHPGDFPDKTLPYHSSFFMGLQRTQQVPVKGGE
PVHLGRCVDEFKWAVNAYTSRKTGMDIRVSHVKRRDIPNFVFPGGIRRLRTSKATWERRQ
RSPQPEASGDIAQCQSKTTVLDGTDGGQKRKRQENGDAETDSSSRHPKSVRCNPPINTVV
ADASISKQAEKLAREPHVPDQVLPKELDELEDDRDQVKDFAGGNMKDSHTMGAIKSNNGA
GPSTACSYIGDLEELEFNELKVPYYQTPSEPVAKPIIRVNFITLASGTC
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgaaaagtaatgaacttgaaaggtatttgcgcaacgatgccgggctttatgagtgtagg
gaggagtctctgattagagaggaagttctaggaagacttgacgagattgttaagcaatgg
gttaaagcaattagccgaggcaaaggtttcgatgaggaatttgtagaagaagcaaatgct
aaggtcttcacctttgggtcatacaggctaggagttcatagccctggcgcagatatagat
acactctgcgtgggaccagcatatgtaactcgagaagagggtttctttggggagctgtat
aagatgttgtctgagatgccagaagaagtaaccgagttgaatcctgtgcatgatgctcat
gttccagttctgaagttcaagttcaatggggtttcgatagaccttgtttatgcaagacta
tcgcttccggttattcctgaagacttagatttgtcacaagactcaatcctacaacatgtc
agtgctggtgatgaacaaactgttcgaagcctcaatggttgtagagttacagaccgaatt
ctaaagttggtcccaaacattcagactttccgcacaacattaagatgcattaggttatgg
gcaaagcatcgtggtgtttattcgaatgttgcagggtttcttggtggtataaactgggca
ttgcttgtggctttcatatgccaactttacccaaatgcattgcctagtctactagtgtct
cggttcttcagggtctatactcagtggcgttggccaaatccagtattgctctgccctatc
aaagaagggcttggacttcaggtttgggatccaagaagaaatgtaagggataggtaccat
ttgatgcctataattaccccagcttatccttccatgaactctagctacaatgtgtcgcag
agtactttgtgtatcatgttaggagagtttcagaggggaaatgacatttgtaaggccatg
gaagcagaaaataaggattttgattggggtacccttttcgagtcatatgctttctttgac
gcgtataagaattacttgcagatagacatatgtgcaggaggtgctgatgacttcaggaaa
tggaaaggctgggttgaatctcggatccgtcaactaacactcaaagttgagaatgaaact
ggcggcatgttgcagtgtcacccacaccctggtgattttccagacaagaccctaccttat
catagctcattcttcatgggactacagcgtacccaacaagttccggtcaaaggaggtgag
ccggttcatttagggagatgtgttgatgaatttaagtgggctgtgaatgcttatacttca
aggaagactggaatggacattcgtgtatcccatgtaaagcgcagggacatccctaatttt
gtatttcctggagggatccgacgtttgcgtacatctaaagcaacttgggagagaaggcaa
cgttcccctcaaccggaggcttcaggcgacatagctcaatgtcagtctaaaacaactgtt
ctagatgggacagatggaggtcagaagagaaaaaggcaggagaatggtgatgcagagacc
gactcctcatcaaggcaccccaagtctgtgaggtgcaacccgccgatcaacactgttgtc
gccgatgcatcaatttctaaacaagcagagaagctggcacgggagccacatgttccggac
caagttttgccaaaagaactggatgagcttgaagatgatagagatcaagtcaaagacttt
gctggtgggaacatgaaggatagtcacacaatgggggcaataaaatctaacaatggagct
ggtccttccactgcttgttcatatattggggacttggaggaacttgagtttaatgaactt
aaggtgccgtactatcaaaccccttctgaacctgtggcgaagccaatcattagagtgaat
ttcattacattggccagtggaacatgttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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