KEGG   Ricinus communis (castor bean): 8283132
Entry
8283132           CDS       T01087                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcu03041]
    8283132
Spliceosome [BR:rcu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    8283132
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    8283132
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 8283132
NCBI-ProteinID: XP_048236162
Position
10:6468578..6476106
AA seq 829 aa
MARNYSDSSDDDRSRHHRYERNSEHRHRDDNKDRDREERKAVKESSDEEGELVERERGGG
RRDRERNNERRDRDRDRDRDRVDEYKRSSDDDDDNKEKRERGERERKRRDENGHGKREIE
DRNRYRQPDERKSGRDRDRVDDRHRSHRNRENVGEYERHKEKKKNNEQIEDSRKEVEEVK
LRKTTLEGGNLNAETPNLGKSGGVYIPPFKLARMMKEIEDKSSTEYQRLTWDALRKSING
LVNKVNATNIKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTPVFAALVAVVNTKFPE
VGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDD
SVEVAVGFVTECGSILQDVSPKGLDGAFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQ
GYPAVRPELDLVEQEDQLTHEISLQEDIDPEITLDIFKPDPDFLENEKRYEELKKSILGE
ESEDEEVSDAASGDEDEDDDEESEEEDEEQMQIKDETETNLINLRRTIYLTIMSSVDFEE
AGHKLLKIKLEPGQEMELCVMLLECCSQERTYLRYYGLLGQRFCMINKVYQENFDKCFVQ
QYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELS
EHLGIRTLNERLTDPNMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMP
RLIMQQQKPVSVSESESDDESGSSSSSDSESASSGSETESDSSSSDEDERRRKRSRSDRD
ERSKKQSKGSHRDERSKNQSKGSHRDERSKNQSRRSDRDERSRKQSRRD
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcgagaaattatagcgattcaagtgacgacgaccggagtaggcatcatcgttatgaa
cgaaacagtgagcataggcacagggacgataataaagacagggatagagaggaacggaag
gcggttaaagaaagttctgatgaagaaggagagcttgtagagagagaaagaggcggcggc
cggcgagatagagagagaaataatgaacgtagggatagggatagagatagagatagagat
agagttgatgagtataagcggagttctgatgatgatgatgataataaagagaaaagagag
agaggagaaagagagagaaagaggagggacgaaaatgggcatggaaagcgagaaattgag
gatagaaataggtacagacaacctgatgagaggaaatcagggcgagatagggatagagtt
gatgacagacacagaagccatagaaatagagaaaatgttggcgagtatgagaggcataag
gagaagaagaagaataatgaacagatagaggatagtagaaaagaagtcgaagaggtaaaa
cttcggaaaacaacgttagaaggagggaatttgaatgctgaaactcctaatttgggtaag
agtggaggtgtttatattcctccttttaagttggctagaatgatgaaagaaatagaagat
aaaagtagtactgagtatcaaagattgacgtgggatgctctccggaagagtatcaatggc
cttgtgaataaggtcaatgctacaaatattaaaaatattattcccgaattgttctctgag
aatcttattcgaggaaggggtttattttgtcgatcctgtatgaagtctcaaatggcttct
ccaggatttactcctgtgtttgctgctctggtagctgttgtcaacactaaatttcctgaa
gtgggtgatcttttgttgaggaggatagtattgcagctcaagagagcatataaacggaat
gacaagcctcaattgctagcagctgttaaatttatcgcacatttggtgaaccagcaagtg
gctcatgagattattgctttagagctacttgctgttttgctggagaatcccacagatgat
agtgttgaggtagctgtgggttttgttacagagtgtggatctatacttcaggatgtgtca
ccaaaaggcttggatggtgcttttgagcgatttcgtgggattcttcatgaaggagagatt
gacaagcgagtgcagtttttaattgagggcctctttgcaattagaaaagccaaatttcag
gggtaccctgctgttcgtccagaactggaccttgtagagcaggaggaccagctgacacat
gagatatcgctccaagaggacatagatcctgagatcacccttgatatttttaaaccagat
cctgatttccttgagaatgagaagcgatatgaagaattgaagaaaagcatccttggtgag
gagtctgaggatgaagaagtttctgatgctgcttcaggtgatgaggatgaggatgatgat
gaagaatctgaggaagaagatgaagagcagatgcaaataaaagatgagactgaaactaac
cttatcaatttacgcagaacaatttatttaaccatcatgtccagtgtagattttgaggag
gcagggcacaaattattgaaaattaaacttgagccaggacaagagatggaactatgtgtc
atgcttttggaatgctgcagtcaggagagaacatacctgcgttactatggtcttttgggt
cagagattttgcatgattaacaaagtctaccaggaaaattttgataagtgctttgttcag
cagtattccatgattcatcgactggagacaaataagttgcgtaatgtggcaaagtttttt
gcacatttacttggaacagatgctctgccttggcatgtgttagcttatatccgcttaact
gaagaggataccacttcttcttctcgcatttttatcaagattctcttccaggagttgtca
gagcatcttggcatccgtaccttgaatgagcgccttacagacccgaatatgcaagactca
tttgaatcaattttcccaagagataatcctaagaatacgcgcttttccattaacttcttt
acatccattgggcttggtggcatcactgaaaatttgcgcgagtacttgaagaatatgcca
cggcttatcatgcaacagcaaaaacctgtgtctgtatctgagtctgaatcagatgatgaa
tctggaagttctagttcatctgactcggagtccgctagctctggatcagaaacagagtcg
gattcatcaagttctgatgaagatgaaagacgcaggaagcgaagtagaagtgatagggat
gaaagaagcaagaagcaaagtaaaggaagccatagggatgaaagaagcaagaaccaaagt
aaaggaagccatagggatgaaagaagcaagaaccaaagtaggagaagtgatagggatgag
cgaagcaggaaacaaagcaggagggattga

  All links  
Gene (43)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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