KEGG   Rhodococcus sp. BH4: A0W34_22320
Entry
A0W34_22320       CDS       T10984                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
rhbh  Rhodococcus sp. BH4
Pathway
rhbh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rhbh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A0W34_22320
  09124 Replication and repair
   03420 Nucleotide excision repair
    A0W34_22320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhbh03021]
    A0W34_22320
   03400 DNA repair and recombination proteins [BR:rhbh03400]
    A0W34_22320
Enzymes [BR:rhbh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A0W34_22320
Transcription machinery [BR:rhbh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     A0W34_22320
DNA repair and recombination proteins [BR:rhbh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     A0W34_22320
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom DUF7108
Other DBs
NCBI-ProteinID: ARE35713
Position
4890554..4892212
AA seq 552 aa
MTDGPLIVQSDKTLLLEVDHERAGDARQAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSYSRFAVPQPLLVDIVDTMARYGRLQLVKSPVHGLILVSLDRAVLTEVM
RHKKISPMLGEKVDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHPIDLAFEEG
HWELRDYQQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWK
RELIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCVEVRVTMTDAERMSYAVAEPEERYKLCSTAHTKIAVVKSILAKHPDSPTLVIGAY
LDQLDELGEALNAPVIKGSTKNKEREILFDQFRNGEIQTLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPAIG
NT seq 1659 nt   +upstreamnt  +downstreamnt
gtgaccgacggaccgttgatcgtccaatccgacaagacgctgctgttggaggtcgaccac
gagcgcgccggcgatgccaggcaggcaatcgcccccttcgcggaactcgaacgggccccc
gaacacgtccacacgtatcgcatcactcccctggccttgtggaatgcccgcgccgccgga
cacgacgccgagcaggttgtcgacgcgctcgtgtcgtactcacgattcgcggttccacaa
ccgctgctggtcgacatcgtcgacacgatggccaggtacggacgcttacagctggtcaag
agcccggtgcacggcctcatcctggtcagcctcgaccgcgcagtcctcaccgaggtgatg
cgacacaagaagatctcgccgatgctcggtgagaaggtcgacgacgacaccgtgatcgtc
cacccgagcgaacgcggccgcctcaagcagatgctgctcaaggtgggctggccggccgag
gacctcgccggctacgtggacggcgaagcgcacccgatcgatctcgctttcgaagagggc
cactgggaactgcgcgactaccagcagatggcagcggattcgttctgggccggcggctcg
ggcgtcgtcgtgctgccgtgtggcgccggcaagacgatggtgggcgccgcagcgatggca
aaggccaaggccaccaccctcatcctcgtcaccaataccgttgccggtcgtcagtggaag
cgtgagttgatcgcgcgtacatcgttgaccgaggaagaaatcggcgaatactccggcgag
cgcaaggagattcggccggtcacgatcgcgacctaccaggtgatcacacgtcgcacgaag
ggcgagtacaagcacctcgaacttttcgactcccgcgactggggactggtgatatacgac
gaggtccacttgctgcccgcgcccgtcttccggatgacggcagatctgcagtcgcgccgc
cgtctcggcctgaccgcaacgctggttcgtgaggacggccgcgaaggcgacgtcttctcg
ctcatcggccccaagcgctacgacgctccgtggaaggacatcgaagcgcagggctggatc
gcgccggccgactgcgtcgaggtgcgagtgacgatgacggacgccgagcgcatgtcctat
gccgtcgccgaaccggaggagcgctacaaactgtgctcgacggctcacacgaaaattgcg
gtcgtgaagtcgatcctggccaagcaccccgattctccgactttggtgatcggtgcgtat
ctcgatcagctcgacgaactcggcgaagccctgaacgccccggtgatcaagggatccacc
aagaacaaggaacgcgagatcctcttcgatcagttccgtaacggtgagatccagacgctg
gtggtgagtaaggtcgcgaacttctcgatcgaccttccggaggcgtctgtcgccgtgcag
gtttcgggaaccttcgggtcgagacaggaagaagcgcagcgactcggacgcctactgcga
cccaagcacgacggcggtcaggctcacttctattcggtggtctcgcgcgacactctcgat
gcggagtatgcggcacatcgtcagcgattcctcgccgaacagggctacgcctaccggatc
accgacgccgatgacctgctcggacctgcaatcggctga

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