KEGG   Rhizobium sp. WYJ-E13: KQ933_01110
Entry
KQ933_01110       CDS       T11043                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
rhiw  Rhizobium sp. WYJ-E13
Pathway
rhiw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rhiw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    KQ933_01110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhiw03400]
    KQ933_01110
DNA repair and recombination proteins [BR:rhiw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     KQ933_01110
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QWW68336
Position
complement(223453..224295)
AA seq 280 aa
MGARASWKGHLKVGDLACAVGLYTAVSSSDRVSFNIINRRTGHRVERQFVDSETGKPVER
DDQVKGYRMESGDYILIEGNEISEIMPVSDKVLDVQGFIPCDGIDKLYFDRPYYLAPVDE
HDAEALALIARGMLDGKVAALAEAVLFRRNRTLLIRAHDEHIIATMLNFDYEVRSASSVF
KDIPDIKFDKEMLDLAGHIIATKEGRFDPSEYHDRYEAALVELVKAKIEGRAPPKRKREP
ERKVVDLMEALRQSAKMGGKAPAKKPAARKTSDRSRRKAS
NT seq 843 nt   +upstreamnt  +downstreamnt
atgggagcacgcgcgagctggaagggccatctgaaggtcggcgaccttgcttgcgccgtc
ggcctttatacggccgtttcctcttccgaccgtgtctccttcaacatcatcaaccgcagg
accggccatcgcgtcgagcgacagttcgtcgacagcgaaaccggcaagccggtggaacgc
gacgaccaggtcaagggctacaggatggaaagtggcgactacatcctcatcgaaggtaat
gagatctcggagatcatgcccgtaagcgacaaggtgcttgatgtacaaggcttcattccc
tgcgatgggatcgacaagctctatttcgaccgtccctactatctggcaccagtcgacgaa
catgatgcggaagccctcgcgttgattgccaggggcatgcttgacggcaaagtggcagcc
cttgccgaagccgtgctcttccgccgcaaccgcacgctgctcatccgcgcgcatgacgag
cacatcatcgcgaccatgctgaacttcgactatgaggtgcgctcagcaagctctgtcttc
aaggacattcccgatatcaagttcgacaaggagatgctggatctcgccggccatatcatt
gcgaccaaagagggccgtttcgatccaagtgaatatcacgaccgctacgaagccgcgctc
gtcgaactggtgaaagccaagatcgaaggtcgcgcaccgccgaaacgcaagcgcgagccc
gagcgcaaggtggtcgatctcatggaggccctgcgccaaagtgcgaaaatgggcggcaaa
gcacccgcgaaaaaacctgccgcacgcaagacctccgatagaagcaggaggaaggcgagc
tga

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