KEGG T11043: KQ933

Rhizobium sp. WYJ-E13: KQ933_05670

Entry

KQ933_05670       CDS       T11043

Name

(GenBank) DNA-directed RNA polymerase subunit alpha

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

rhiw Rhizobium sp. WYJ-E13

Pathway

rhiw03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:rhiw00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KQ933_05670
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhiw03021]
    KQ933_05670
   03400 DNA repair and recombination proteins [BR:rhiw03400]
    KQ933_05670
Enzymes [BR:rhiw01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KQ933_05670
Transcription machinery [BR:rhiw03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KQ933_05670
DNA repair and recombination proteins [BR:rhiw03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KQ933_05670

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211 IDH

Other DBs

NCBI-ProteinID:

QWW69193

Position

1129252..1130262

AA seq 336 aa
MIQKNWQELIKPNKVEFSSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETDGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY

NT seq 1011 nt +upstreamnt +downstreamnt
atgattcagaagaactggcaggaactgatcaagccgaacaaggtcgagttctcttcgagc
tcgcgcaccaaggcgactctcgttgcagagccgcttgagcgtggtttcggcctcaccctc
ggcaacgcgttgcgtcgcgttctgctctcctctctgcgcggtgcggctgttacggccgtg
cagatcgacggcgtgctgcatgaattctcctcgatcccgggcgttcgtgaggacgttacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgccaagcgc
atggtcgtgcgcaaacagggtccgggtgttgtaaccgctggcgacatccagacggtcggc
gatatcgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggtgccgaaatc
cgcatggagttcaccgtcaacaacggcaagggctatgttccggccgagcgcaatcgtgcg
gaagatgctccgatcggtcttatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgtgaaggacaggttctcgactacgacaagctgacaatg
accatcgaaaccgatggctctgtctccggcgaagatgccgtcgctttcgcggctcgcatc
ctgcaggaccagcttggcgtcttcgtcaacttcgacgaaccgcagaaggaagccgaagaa
gaagccgtcaccgaactggccttcaacccggcgctcctcaagaaggtggacgaactcgaa
ttgtcggttcgttcggcaaactgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcaccccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgcaaagcgttacgaagaccaatattaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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