KEGG   Rhizobium favelukesii: LPU83_3911
Entry
LPU83_3911        CDS       T03046                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhl  Rhizobium favelukesii
Pathway
rhl00010  Glycolysis / Gluconeogenesis
rhl00020  Citrate cycle (TCA cycle)
rhl00260  Glycine, serine and threonine metabolism
rhl00280  Valine, leucine and isoleucine degradation
rhl00310  Lysine degradation
rhl00380  Tryptophan metabolism
rhl00620  Pyruvate metabolism
rhl00630  Glyoxylate and dicarboxylate metabolism
rhl00640  Propanoate metabolism
rhl00670  One carbon pool by folate
rhl00785  Lipoic acid metabolism
rhl01100  Metabolic pathways
rhl01110  Biosynthesis of secondary metabolites
rhl01120  Microbial metabolism in diverse environments
rhl01200  Carbon metabolism
rhl01210  2-Oxocarboxylic acid metabolism
rhl01240  Biosynthesis of cofactors
Module
rhl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LPU83_3911 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LPU83_3911 (lpdA)
   00620 Pyruvate metabolism
    LPU83_3911 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LPU83_3911 (lpdA)
   00640 Propanoate metabolism
    LPU83_3911 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LPU83_3911 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LPU83_3911 (lpdA)
   00310 Lysine degradation
    LPU83_3911 (lpdA)
   00380 Tryptophan metabolism
    LPU83_3911 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LPU83_3911 (lpdA)
   00670 One carbon pool by folate
    LPU83_3911 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhl04147]
    LPU83_3911 (lpdA)
Enzymes [BR:rhl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LPU83_3911 (lpdA)
Exosome [BR:rhl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LPU83_3911 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored FAD_binding_2 NAD_binding_8 Pyr_redox_3 HI0933_like GIDA Lys_Orn_oxgnase Thi4 FAD_binding_3 AlaDh_PNT_C DAO DUF4236 Lycopene_cycl
Other DBs
NCBI-ProteinID: CDM59547
UniProt: W6RE41
Position
complement(3885162..3886568)
AA seq 468 aa
MSYDVIVIGTGPGGYVAAIKAAQLGLKVAVVEKRATFGGTCLNVGCIPSKALLHASEMFH
QAGHGMDALGIEVAAPKLNLGKMLAHKDATVKSNVDGVAFLFKKNKIDAFQGAGKIVSAG
KVSVAGEDGKVQEIEGKNIVIATGSDVAGIPGVKVDIDEKVIISSTGAIALEKVPETMIV
VGGGVIGLELGSVWSRLGAKVTVVEYLDTILGGMDGEVSKQFQRMLVKQGIAINLSSKVT
GVEKGGKGAKVSFEPVKGGDAQTLEAEVVLIATGRTPYTAGLGLQEAGVKLDDRGRVEID
GRFRTNVAGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQHGHVNYDVIPSVVYTQPEVA
SVGKTEEELKAAGITFKVGKFPFTANGRARAMLAIDGFVKILSDKETDRVLGGHIVGFGA
GEMIHEIAVLMEFGGSAEDLGRTCHAHPTMSEAVKEAALAAFFKPIHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtcctatgatgtaatcgttatcggaaccggccctggcggctacgtcgctgccatcaag
gctgcgcagctcggcctcaaggtcgctgtcgttgaaaagcgtgcaacgttcggtggcacc
tgcctgaacgtcggctgcatcccgtccaaggcgctgcttcatgcctccgaaatgtttcat
caggctggccacggcatggacgcgctcggcatcgaagtcgctgcgccgaagctgaacctt
ggaaagatgctggcgcacaaggatgcgacggtgaagtcgaacgtcgacggcgttgccttc
ctcttcaagaagaacaagatcgatgccttccagggcgccggcaagattgtgtcggcaggc
aaggtttccgtggccggcgaagacggtaaggtgcaggaaatcgaaggcaagaacatcgtc
atcgccaccggctccgacgtcgccggcattccgggcgtgaaggtggatatcgacgagaag
gtgatcatctcatcgacgggcgcgatcgcgctcgagaaggtgccggagacaatgatcgtc
gtcggcgggggcgtcatcggcctcgagctcggctccgtctggtctcgcctcggtgccaag
gtcaccgtggtcgaatatctcgatacgattctcggcggcatggatggcgaagtctccaag
caattccagcggatgctcgtcaagcagggcatcgccatcaacctgagctcgaaggtgacg
ggcgtcgagaagggcggcaaaggtgccaaggtgagtttcgagccggtcaagggcggcgat
gcgcagacactcgaagccgaggtcgttctgatcgcgaccggccgcaccccctacacggca
ggccttggtctgcaagaagcaggcgtaaagcttgatgaccgtggccgcgtcgaaatcgac
ggtcgcttccgcaccaacgttgccggcatctacgcgatcggcgacgtggtgaaggggccg
atgctggcccacaaggccgaagatgaaggcgttgcgctggcagaaatcctcgccggtcag
catggccatgtgaactatgacgtcatcccgagcgtcgtctacacgcagccggaagtcgcc
tccgtcggcaagaccgaggaagagctgaaggctgccggcatcaccttcaaggtggggaag
ttccccttcacagcgaacggtcgcgcccgcgccatgttggcgatcgacggtttcgtgaag
atcctctccgacaaggaaaccgaccgtgtcctgggcggtcatatcgtcggtttcggagcc
ggcgagatgatccacgagattgccgtcctcatggaattcggcggttccgcagaagatctt
ggccgcacctgccatgctcacccgaccatgtcggaagcggtgaaggaagccgctctcgcc
gcgttcttcaagccgatccacatgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (19)   

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