KEGG   Rhodococcus sp. PBTS 1: A3Q40_03755
Entry
A3Q40_03755       CDS       T05182                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rhu  Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:rhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhu03032]
    A3Q40_03755 (gyrB)
   03400 DNA repair and recombination proteins [BR:rhu03400]
    A3Q40_03755 (gyrB)
Enzymes [BR:rhu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     A3Q40_03755 (gyrB)
DNA replication proteins [BR:rhu03032]
 Prokaryotic type
  DNA Topoisomerases
   A3Q40_03755 (gyrB)
DNA repair and recombination proteins [BR:rhu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A3Q40_03755 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AMY21103
UniProt: A0A143QD26
Position
complement(4003391..4005430)
AA seq 679 aa
MADRNSGKSDKPGDKSKEYDASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNS
VDEAMAGYATTVEVTLLADGGVRVVDDGRGIPTGMHASGMPTIEVVMTQLHAGGKFDSDS
YAVSGGLHGVGISVVNALSTTLLAEVDNAGHHWTQTYDRSVPGPLKKGEPTDRTGTSISF
WPDPDIFETTVFKFETVARRLQEMAFLNKGLTIVLTDERASDAERIADETADSELAEAPK
PEGDSESRIKTKTYHYPGGLEDYVRYINKSKTAQHPSVIGFGAKGTGHELEIAMQWNQTY
TESVHTFANTINTHEGGTHEEGFRTALTTVVKKYAKEKKLVKEKDGELSGDDIREGLAAI
ISVKVGEPQFEGQTKTKLGNTEVKSFVQKASGEHLTHWFEANPAEAKLIVGKAVASMQAR
TAARRARDLVRRKSATDIGGLPGKLADCRSNDPSKCEIYIVEGDSAGGSAKSGRDSMYQA
ILPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDG
QHISTLLLTLLFRFMRPLVEHGYVYLAMPPLYKLKWQRGADPEFAYSDRERDGLLEAGLA
AGKKINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDV
EARRSFITRNAKDVRFLDV
NT seq 2040 nt   +upstreamnt  +downstreamnt
gtggctgaccggaattcggggaagagcgacaaacccggcgacaagtccaaggaatacgac
gcatcgtcgatcaccgtcctcgaggggctcgaggcggtgcgcaagcgccccggcatgtac
atcggatccactggtgagcgcggcttgcaccatctcatctgggaggtcgtcgacaactcc
gtcgacgaggcgatggccgggtacgccaccaccgtcgaggtcaccctgctcgccgacggc
ggcgtccgggtggtcgacgacggccgcggtatccccaccggcatgcacgcgtcgggaatg
cccaccatcgaggtggtgatgacccagctgcacgccggcggcaagttcgactccgattcc
tacgcggtgtccggcggcctgcacggcgtcggcatctccgtggtgaacgccctgtccacg
acgctgctggccgaggtcgacaacgccggtcaccactggacgcagacctacgaccggtcc
gtccccgggccgctgaagaagggcgagccgaccgaccgcacgggtacgtcgatctccttc
tggccggaccccgacatcttcgagaccacggtcttcaagttcgagacggtggcgcgccgc
ctgcaggagatggccttcctgaacaagggactgaccatcgttctcaccgacgagcgggcg
tccgacgccgagcgcatcgccgacgagaccgccgacagcgaactcgccgaggcgccgaag
ccggagggcgacagcgaatcgcggatcaagacgaagacctatcactaccccggtggtctc
gaggactacgtccggtacatcaacaagtccaagacggcgcagcatccgtcggtgatcggc
ttcggggccaagggcaccggccacgaactcgagatcgccatgcagtggaaccagacctac
accgagtcggtccacaccttcgcgaacaccatcaacacccacgagggcggcacccacgag
gagggcttccgtaccgcgttgaccacggtggtgaagaagtacgcgaaggagaagaagctc
gtcaaggagaaggacggcgagctcagcggcgacgacatccgcgagggtctggccgccatc
atctccgtgaaggtcggcgagccgcagttcgagggtcagaccaagaccaagctcggcaac
accgaggtgaagtccttcgtacagaaggcatccggagagcacctgacgcattggttcgag
gcgaatccggccgaggctaagctgatcgtcggcaaggctgttgcctccatgcaggcacgt
accgcagcgcggcgcgcacgagatctggtgcggcgcaagagcgccaccgacatcggtgga
ctgcccggcaagctggccgactgccggtccaacgatccgagcaagtgcgagatctacatc
gtggagggcgattccgccggcggctccgccaagtcgggccgcgactcgatgtaccaggcg
atcctcccgctgcgcggcaagatcatcaacgtggagaaggcgcgcatcgaccgcgtgctg
aagaacaccgaggtccagtcgatcatcacggcgttcggcacgggcattcacgacgagttc
gacatcgccaagcttcggtaccacaagatcgtgctcatggccgacgccgacgtggacggc
cagcacatctcgacgctgctgctcaccctgctgttccggttcatgcgcccgctcgtcgag
cacggctacgtctatctcgcgatgccgccgctgtacaagctgaagtggcagcgcggcgcc
gacccggagttcgcgtactccgaccgcgagcgcgacggtctgctcgaggccggcctcgcc
gcgggcaagaagatcaacaaggacgacggcatccagcgctacaagggcctcggcgagatg
aacgccaaggagctgtgggagaccacgatggatccgagcgtgcgcgtgctgcggcaggtc
accctcgacgacgccgctgccgccgacgaattgttctccatcctgatgggtgaggacgtc
gaggctcgtcgcagtttcatcacccgtaatgccaaggacgttcgtttcctcgacgtgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (8)   

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