KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130096011
Entry
130096011         CDS       T09701                                 
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130096011 (papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rkg03019]
    130096011 (papola)
Enzymes [BR:rkg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     130096011 (papola)
Messenger RNA biogenesis [BR:rkg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     130096011 (papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 130096011
NCBI-ProteinID: XP_056118602
Position
Unknown
AA seq 740 aa
MPFPITNQVQTVQQTPKHYGITSPISLAPPKEADLVFARKLTETLRPFGVFEEEMELQRR
ILVLGKLNMLVKLWIREVSETKNIPASVIESVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPEN
LDLRDDGLLRNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKMWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKL
FEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGLKEGADKEEFSTMWVIGIVFKKMEGKSENLNVDLTFDIQSFTDTVYRQAITSKMFEQD
MKITAMHVKRKQLHQLLPKVAIQRGKRKHSSDGIRVMNDGSLDLSVDSDNSMSVPSPTGP
SAAKSARASSPQGSTGTATNNSDLQGKTDTSSGSPLLAGAVDGSKPDNVGTSSSNTPRKG
AAALKRPASPLQQDLEKKAKVDSVQQDPHPSPCLSASPASKRPASPLENETAKKAKVEDF
STPEAKSGEADDHVAADPASIEVVPSDGELKTETELTVVETAEKIPLSQKISHTDLSDVQ
ILPSNPIAVVKNSIKLRLSR
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgccttttccaattaccaatcaggtgcagacagtacagcagaccccaaagcattatggg
atcacgtctcctatcagcttggcaccgcctaaagaggccgatctggtctttgcgcggaag
ctgacggagacactccgacccttcggcgtctttgaggaggagatggagctgcagcggaga
atcctagtgcttgggaagttaaatatgttggttaagttgtggatccgtgaagtcagtgag
acgaagaatattccagcatcagtgattgaaagtgttggtggaaaaatcttcacgtttgga
tcctacaggcttggagttcataccaagggtgctgatattgatgctctctgcgttgcaccc
cgacatgtggagagaacagactttttctcctcgttttatgagaaattaaaggagcaggag
gaagtcaaagacctgagggcggtggaggaagcatttgtacctgtgataaagctggctttt
gatggcattgagattgacatactgtttgcccgactggcactacaaaccattccagagaat
ctggatttgcgagatgacggcttgttaaggaaccttgacattcgctgcattcggagtttg
aatggttgcagagtgactgatgagattcttcacctggtgcccaacattgagaatttcaga
ctgactcttagagccatcaaaatgtgggccaagcgccataatatctactcgaatatcctt
ggttttctcgggggtgtatcgtgggccatgctggtggcaagaacttgccaactctaccct
aacgctgtggcttccaccctggtccacaagttcttcttggttttctcaaagtgggaatgg
ccaaaccctgtccttctgaagcagcctgaagactgtaatctcaacctcccagtctgggat
cccagagtaactccgagtgaccggtaccacctcatgccaatcatcacgccagcttaccct
caacaaaattccacttacaatgtctcggcatctactcgggccatcatggtggaagagttc
aagcggggtcttgctatcacggatgaaatattgcagaataaagcagattggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatatagtgttgctagcaagcgca
cagacagagaagcagcacttagagtgggtgggcctcgtggaatcaaagatccgaatcctg
gtgggaaacctggagaagaacgagttcatcacactcgcccatgtgaatccacagtcattc
ccgggactaaaagagggagctgacaaggaggagttcagcacaatgtgggtaataggtatt
gtgttcaaaaaaatggagggaaaatccgaaaatctcaacgtggacctgacgttcgatatc
cagtccttcactgacacagtttaccggcaggcgatcactagtaaaatgtttgagcaagat
atgaaaatcaccgccatgcatgtgaagaggaaacaactgcatcaactacttcctaaagtc
gccattcaaaggggcaagagaaagcattcgtctgatggcattcgtgtgatgaatgacggc
agtctcgacctatcggttgacagtgacaacagcatgtcagtgccctcccccacaggccct
tcagctgccaagagcgcccgtgcctccagccctcagggttccactgggacggccacaaac
aactcagatttgcagggaaaaacggacacttcaagtgggagccctctcctggctggtgca
gtggatggatctaaacctgataatgttgggacctccagcagcaacaccccgcgtaagggg
gcagctgcactgaagaggcctgcctcaccccttcagcaagatttggagaagaaagccaaa
gtggacagtgtccaacaggaccctcatcccagtccatgtttatctgctagccctgccagc
aagagacctgcctctcccctcgagaacgagacggccaagaaagccaaagtagaggatttc
tcaaccccagaagcaaagtcaggtgaagctgatgaccatgtggctgcggatccagcgagc
attgaagtggttccttcagatggtgaattgaaaacggagacagaattaacggtggtggaa
accgcagagaagatcccgctttcccagaaaatttcccacaccgatctgtcggacgtccag
atcctcccgtccaaccccatcgcagtggtcaagaactccatcaagctgagactcagcagg
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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