KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130100296
Entry
130100296         CDS       T09701                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rkg03041]
    130100296 (cwc22)
Spliceosome [BR:rkg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    130100296 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    130100296 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1 DUF7026
Other DBs
NCBI-GeneID: 130100296
NCBI-ProteinID: XP_056121667
Position
Unknown
AA seq 989 aa
MAAEANESKTVLNMSPTSRNEPPSPGEMEQRQRKASTSSSENGDSDGDERRRVVAGRHEG
SSGSAQPESSGIRDGSPRAGSAVARASGSDSDSSEDDSDDGVVHKIKSSVTHIKRASDDE
SKNRQKSSSPERDEKRSQSRSRSRSRSRSRSPQERYGRGRRSRERDRERYGDRDRYERRS
SRERDWEHRRRGRSASPDKNDKPPTEQPPVKKRKEALDPILTRTGGAYIPPAKLRMMQAQ
ITDKSSLEYQRMSWEALKKSINGLINKVNVSNIANIIQELLQENIVRGRGLLARSTLQAQ
AASPIFTHVYSAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTASKFVAHLIN
QNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNILHE
SEIDKRVQYMIEVMFAIRKDGFKDHPIVPEGLDLVEEEDQFTHMLPLEDEYNTEDILNVF
KLDPNFLENEEKYKAIKREILDEGSSDSGDDAGGSGDEDDEEEDEEAAAAEEQEKVTIFD
QTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEKF
FGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARLFAHLLYTDSVPWSVLE
CVRMSEDTTTSSSRIFVKILFQELCAYMGLPRLNERLKDMTLQPFFEGLFPRDNPRNTRF
AINFFTSIGLGGLTDELREHLKNAPKIIMTQNQDVESSDSDSSSSSSSDSSSSSDSSSDS
DSSDSDSDSSSGSNSSSSDSSSDSDSRRKKASGKKKDKNKEKKSSKAANQRSPLEERPTK
KHENRRQDGDKEDRRGPDKLQRDSRRRGHGDESPPARQRGEPERGRGHKEQQHPRHAQDY
EDRQPDSRRHKDDGKNDSRADKDKDRRQSREREPLRRSRDRSKSRERSRKEIDSRDSYRN
GLERADKENRHSDRRKDERSRDGSPRRRR
NT seq 2970 nt   +upstreamnt  +downstreamnt
atggcagccgaggcaaacgagtccaagacggtattgaatatgagtcctacatccagaaat
gagccgcccagcccaggagaaatggagcagcgacagagaaaggccagcacaagttcatct
gagaatggagacagtgatggtgatgaacgcaggagggttgttgcaggtagacacgagggt
agctctggttcagctcaacctgagagctctggcatcagagatgggagtccacgagcaggc
agtgctgtggcgagggccagcggttcagacagcgacagcagtgaagacgacagtgatgat
ggtgtagtgcacaaaataaagagtagtgtcacacatatcaagcgagcctctgacgatgag
agcaaaaacagacaaaaaagctcctcacctgagagggatgaaaagaggtcacagtcaaga
tcccgctctagatctcgctccagatctcgctctcctcaagaacgttacggaaggggtcgt
agatccagggagcgtgatcgagaacgctatggcgatcgggatcgttacgagcggcgctcc
agcagagagagggattgggaacacaggaggaggggaaggtcagcctccccagacaaaaat
gataaacctcccaccgagcagcctccagtgaagaagaggaaggaagcactggaccccatc
ctgacccgcaccggtggggcctacatcccaccggccaaactgcgtatgatgcaggctcag
atcactgacaagagcagtttggagtatcagaggatgagctgggaagccctgaagaagtcc
atcaatggtctgatcaacaaagtgaacgtttccaacattgccaacattattcaagagctg
ctgcaggagaatattgtgaggggcaggggtcttctggccaggtctacacttcaggcccag
gctgcctctcccatcttcacccatgtgtactctgctgtggtggccatcatcaactccaag
tttcctcagatcggagaacttatcctcaagagacttatcctcaatttccggaaaggttac
aggaggaatgataaacaacaatgtctcacagcgtccaagttcgtggctcatctcatcaac
cagaatgtggcccatgaagtcctgtgtctggagatgttaaccctgctgttggaaagaccc
actgatgacagtgtggaggttgccatcagctttctaaaagagtgtggtctcaaattgaca
gaggtctctccccgaggcatcaatgccatctttgaacgtctgaggaacatcttgcatgag
tcagagatagataagcgtgtacagtacatgattgaggtgatgtttgccatcaggaaggat
gggtttaaggaccaccccatcgtcccagaagggcttgacctagtggaggaggaggaccag
ttcacgcacatgcttcctctggaggacgaatacaacacagaggacatcttaaatgtcttc
aagttggatcccaacttcctggagaacgaggagaagtacaaagcaattaaacgggaaatt
cttgacgaaggaagcagcgattctggcgatgacgctggcggcagtggagatgaagacgat
gaggaggaagatgaagaggcggcagctgcagaagaacaagaaaaagtcaccattttcgac
cagacagaggtgaacttggtcgcgttccgtcgaacgatttacctcgccatccagtcaagc
ttggacttcgaagagtgcgcccacaagttgataaaaatggatttccccgatagccagacg
aaagagctgtgcaacatgatcctggactgttgtgcccagcaaagaacatacgagaagttc
tttggtctcctagctgggaggttttgcctgttgaagaaagaatacatggagagttttgag
gccatcttccaggagcagtatgaaaccatccaccggcttgaaaccaacaaacttcgcaat
gttgcccgattgtttgctcatctcctttacacagactctgttccatggagtgtccttgaa
tgcgttagaatgagcgaagacacaacgacgtcctccagtcgaatctttgtgaagattttg
ttccaggaactttgcgcttacatgggtttgccaagactgaacgagagactgaaggacatg
actcttcagcctttcttcgagggtctgttcccacgtgacaacccgaggaacacaagattt
gccattaatttcttcacatcgatcggccttggaggactgacggatgagctgagagaacat
ctgaagaacgctcctaagattatcatgacccagaatcaggacgtggagtcatctgattct
gattcatcttcctcttcctcttcagactcctcctcatcttcagattcctcatctgacagt
gacagcagtgatagcgactcggactcgtccagcggctcgaactcctccagcagtgacagc
tcttcagactctgactcgaggcgcaagaaggcttcaggcaagaaaaaagacaagaacaag
gagaagaagtccagcaaggcagcaaaccagcgatctccactggaggagcggcccaccaag
aagcacgagaaccgccggcaagatggcgataaagaggaccgccgtggacccgacaaactc
caaagagattctcgccgccggggacacggggacgagtcgccccctgctcgacaacgagga
gaaccggagcgtggaagaggacataaagagcagcagcatcccagacacgctcaggactat
gaggacagacagccagattcacgcaggcacaaggacgatggcaaaaacgactcccgagcg
gacaaggacaaagatagacggcagagccgagagagggagcctctgcggaggagccgggac
aggtcaaagtcacgagagaggagccgcaaagagatcgactccagggactcgtacaggaac
ggcttggagagggcggacaaagagaacaggcattctgacaggaggaaagacgagaggagc
agggatggctcaccgaggagacgcagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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