KEGG   Rhopalosiphum maidis (corn leaf aphid): 113558767
Entry
113558767         CDS       T06065                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113558767
Spliceosome [BR:rmd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    113558767
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    113558767
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 113558767
NCBI-ProteinID: XP_026820101
Position
3:54822519..54831170
AA seq 605 aa
MGRVGVANGGRVHAADDDTRSLAIIRANAPLTSTPIARRLLSHNMHSEPTPSSSSSSSPQ
PKSSAMELPPPPPPYPLNARGRYRHIRRVCPRAGGEKGNSKLTTIPEFIIHKQSDEYQII
AWTILQQSISNLVQQVTSEDKAREIAKKILRLNIMRGKGLLCKYIMSVQLASTDKTHIYA
LFISLIYLEFPDVGGLLLVRCLQQFKVANKTKEKCEYLTSVLFISYLIIYEVVSPLMAVK
LLSFLVKLPTQDSIDAAFVILNTCGHKMSDSNKKELENLINLGPSTSAYNIRSGKKIRRM
IQIIMETISLKNVLKFKKPTMTKFRTPFNISLESQIDPHLELDYYSYDPYYEYTEELYEL
FRTQVLESDDKDEYVLMYDTETYDKKNKKKNKFVIKYSGNPKIDKNSNSLQELVQMILDS
STFKYENCAYQLMKIKLNPGQEMEICLMLFELCFERDSYNERLGYITQIFCQLNRFLIEP
FEKLFVDTYAIVNSFDTIKLRNIAKYFAQLLYSDTISWKVLSAIRLNEIETTASTGNFLK
HLFHELSEHMGEEELKYRVEDPSLKYAFEGIFFGDKYNNSTFSFDFFSSIGLGGLIKTFE
KSLIF
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggggcgggtaggcgttgcgaacggtggccgtgtacacgccgcggacgacgacacacgc
tcgctcgccatcattcgtgccaatgcaccgttgacgtccacacctattgcgcgccgtctc
ctcagccacaacatgcactcggagcctactccgtcgtcgtcgtcgtcgtcgtctcctcaa
ccgaaatcttcagcgatggaattgccgccgccaccgccgccgtatcctttgaacgcacga
ggccgctaccgccacatcagacgcgtctgtccgcgtgccggtggagaaaaaggaaatagc
aagctaaccacgattccagagttcataattcacaaacaaagtgacgaatatcagataatt
gcttggacaatattacagcagtcaatctctaatttagtacaacaggtgacttcggaagac
aaagccagggaaatcgcaaaaaagattttacgtttaaatataatgcgtggtaaaggtcta
ctttgcaagtacattatgtctgttcagttagcttcgaccgataaaactcacatctacgct
ttgtttatttctcttatctaccttgagtttccagacgtaggagggttactcttggtacgg
tgtcttcagcagtttaaagtcgcaaacaaaacaaaagaaaaatgtgaatatttaacatct
gttctatttatatcatacttgattatttacgaagtagtgtcaccgcttatggctgttaaa
ctattatcgtttctcgtcaagttaccgacacaggattcaattgatgcagcatttgtgatt
ctaaacacatgtggacataaaatgagtgatagtaataaaaaggaactcgaaaaccttata
aacttggggcccagtacttcggcgtacaacatacggtctggcaaaaagattagacgtatg
atacaaataataatggaaactatttcacttaaaaatgtattaaaattcaaaaagcctacg
atgactaaattcagaacgccttttaatatttctttggaaagccaaattgatccacacttg
gagttggactattattcttacgacccatattatgaatatactgaagaactgtatgaatta
tttcgtacacaagttctagaatctgatgataaagatgaatacgtattaatgtatgatact
gagacctatgataaaaaaaataagaagaaaaataaatttgtgattaagtactcgggaaat
ccaaaaatagacaaaaactcgaattctttacaagaattagtccaaatgatactggactca
tcaacttttaagtatgaaaattgtgcttatcaattaatgaaaataaaattgaatcccggc
caagaaatggaaatttgccttatgctttttgagctttgctttgagcgtgattcatataat
gagcgtcttggatatataacacaaatattttgtcagttaaacagatttctaattgaaccg
tttgagaaattatttgttgacacctacgctattgtcaacagttttgacacaataaaatta
cgtaatattgcaaaatattttgctcaactgctgtatagtgatacaatttcttggaaagtt
ttgtcagctatacgacttaatgaaattgaaacaacggcttctactggtaattttctcaag
catttgtttcacgagttaagcgaacatatgggagaagaagaattgaagtatcgcgtagag
gacccttcattgaaatatgcgtttgaaggaattttttttggagacaaatataacaactca
acattttctttcgactttttttcatctattggtttgggtggcttaattaagacattcgaa
aaatcattaattttctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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