KEGG   Rhopalosiphum maidis (corn leaf aphid): 113559093
Entry
113559093         CDS       T06065                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113559093
Spliceosome [BR:rmd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    113559093
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    113559093
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 113559093
NCBI-ProteinID: XP_026820484
Position
3:54729212..54733798
AA seq 502 aa
MNVVTKNNVCNVSEQMSNWDNLKLSIEAAIEKLNPGNIRHTRNKLLQLNIVRGKGLFCQA
IINAQSASLHSTNMYATLVSFINLEFPNVIELLLIRCIYMFTNAYKFKKEYKYKPPILFI
IFMINHNVAKDWLALDIIKKLIKSPTKHSLDMVEVILKVCGTKINSNPENKLDLKYTFDT
LQNISQDDQIDKSVQCLAARIILITYRDYYEDEQQFDLVDRRKQYTHLMTLNCDYDPLYE
LDYFIYDVDFKSNEIIYTTNIKQILKLKRKVWYFAKYDFDEMADDEDEHESEANMLSLSR
NIAIKKTINIMVNLNLPPLDIALEIMQIKLKPGQEMKLCHVYLDCCFEHSIIYNAVFGNI
IQSLCLINASIVEALETYFMQCYPTIHHFHPYKLVNLAKLFAQLLYSDSISWKIFSTVRL
TESETTYSSRAYLKNIFKDLIVYMGRDSLKERILDPSLQRSFSGLFPFNNHGNYRLCDIF
FTDIGMEDLIIQYRESYQSVPV
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaacgtcgttactaaaaataatgtttgcaatgtatcagaacagatgagtaattgggat
aatttgaaattatctattgaagctgcaatagaaaagttaaacccaggcaatatacgacat
acaagaaataaattattgcaactaaatattgtacgtggaaaggggttattttgtcaggct
ataataaacgcacagtcggcatcactccacagcacaaatatgtatgctactttggtttcc
ttcattaatctcgagtttcctaacgttattgaactgctgttgataaggtgcatttatatg
ttcacaaatgcatacaaatttaaaaaggagtacaaatacaaaccaccaatactatttata
atttttatgattaatcacaatgttgctaaagactggttggctcttgatattattaaaaaa
cttataaaatcaccgaccaaacactcattggatatggtagaagtaattttgaaagtatgt
ggtacaaaaattaattcgaatccagagaataaactagacttgaaatatacgtttgatacg
ctgcaaaatatttcgcaagatgatcaaattgataaatcggttcaatgtttggcggcaaga
attatattgataacatatcgagattattacgaagacgaacagcagtttgatttagtagat
cgtcgtaaacaatacactcatttaatgactttaaattgtgattacgatcctctttatgaa
ctagattattttatatatgatgtagattttaaatctaatgaaattatttatacaactaat
atcaagcaaatactaaaattaaaacgtaaagtttggtattttgctaaatatgattttgac
gaaatggccgatgatgaagatgaacatgaatcagaagcaaatatgttatcattaagcaga
aacatagcaataaaaaaaaccattaacataatggtaaatttaaacttacctccacttgat
attgctcttgaaataatgcaaattaaattgaaacctggtcaagaaatgaaactgtgccat
gtatatttggattgctgctttgaacatagtattatatacaatgcagtttttggaaacata
attcaaagtttatgtctcataaacgcttcaattgtcgaagcattagaaacttattttatg
cagtgctacccaactatccaccatttccacccatacaaattagtaaaccttgctaaattg
tttgctcaacttttatattctgattcgatttcttggaaaatattttcaacagtacgactg
actgaaagtgaaacgacttattctagtagagcatatttaaagaatatctttaaagattta
attgtttacatgggacgcgatagtttgaaagaacgtattctggacccttctttacaaaga
tcgtttagtggattatttccgtttaataatcacggtaattatcgactttgcgatattttt
ttcacggatattggtatggaagacttaattattcaatatagagaatcttatcaaagcgta
cctgtttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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