KEGG   Cupriavidus metallidurans: Rmet_2688
Entry
Rmet_2688         CDS       T00351                                 
Symbol
ribD
Name
(GenBank) fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rme  Cupriavidus metallidurans
Pathway
rme00740  Riboflavin metabolism
rme01100  Metabolic pathways
rme01110  Biosynthesis of secondary metabolites
rme01240  Biosynthesis of cofactors
rme02024  Quorum sensing
Module
rme_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:rme00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Rmet_2688 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmet_2688 (ribD)
Enzymes [BR:rme01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Rmet_2688 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Rmet_2688 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: ABF09561
UniProt: Q1LJW5
Position
2919958..2921079
AA seq 373 aa
MFSAADYTAMEQALALAARGMFTTTPNPRVGCVLMKDGVVIGEGYTQPAGQDHAEIQAMK
DAISRGHDPAGATAYVTLEPCSHFGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQR
LRDAGIDVRCGLLEKEARDLNIGFISRMTRGLPWVRVKVAASLDGGTALHDGTSQWITGQ
PARDDGHAWRARACAILTGIGTVRDDNPALTVRAIPTPRQPQRVLVDSRLEVPLDAQILN
RDTGDFAKPVLVFCAIEDKARQRALEARGVEVVVLPNPHGKVELRRMLEELARRGINELH
VEAGFKLNGSLIREGCADELLVYLAPKLLGDAQGMFNLPPLSKLEDATEFRWHEVRQIGD
DLRLIARRADTQH
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgttttccgccgctgactacaccgccatggaacaggccctcgcgctcgccgcgcgtggc
atgttcaccaccacgccgaaccctcgtgtcggctgcgtgctgatgaaggacggggtggtc
atcggggaaggttacacgcaaccggccggccaggatcatgccgagatccaggccatgaag
gatgcgatctcgcgcggccatgatcccgctggcgccaccgcctacgtcacgctggaaccg
tgcagccacttcggccgcacgccaccatgtgccgacgcgctggtacgcgctggtatcgcg
cgcgtggtggctgccatggaagatccgaatcccaccgtatccggccgtggcctgcagcgc
ttgcgcgacgcgggcatcgacgtccgctgcgggctgctggaaaaggaagcgcgggatctc
aatatcggctttatctcgcgcatgacgcgcggacttccctgggtgcgcgtcaaggtagct
gcatccctcgacggcggcactgcgctgcacgatggtacgagccagtggatcaccggccag
cccgcacgcgacgacgggcacgcctggcgcgcccgggcctgcgccatcctgaccggtatc
ggcaccgtccgcgatgacaatccggcactgaccgtgcgtgccatcccgacgccgcggcag
ccgcagcgcgtgcttgtcgactcacggcttgaagtgccgctcgacgcgcagatcctcaac
cgcgataccggcgacttcgccaaacccgtgctggtcttctgtgccatcgaagacaaggcc
cgccagcgcgcgctcgaggcacgtggcgtcgaagtcgtggtactgcccaatccgcatggc
aaggtggaactgcgccgcatgctggaagaactcgcgcggcgaggcatcaacgaactccac
gtggaagcgggtttcaagctcaacggctcactgatccgcgaaggctgcgcggacgaactg
ctggtctacctggcgccgaagctgcttggcgacgcgcagggcatgttcaacctgccgccg
ctgtcgaagcttgaggacgcgaccgaattccgctggcacgaagtgcgccagattggcgac
gatttgcgcctgatcgcgcgccgcgccgacacccaacactga

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