KEGG   Rhipicephalus microplus (southern cattle tick): 119176086
Entry
119176086         CDS       T07403                                 
Symbol
ncm
Name
(RefSeq) pre-mRNA-splicing factor nucampholin isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmp03041]
    119176086 (ncm)
Spliceosome [BR:rmp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    119176086 (ncm)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    119176086 (ncm)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1 HEAT_5MP1_2 DUF7026 PRP38 INTS7_N
Other DBs
NCBI-GeneID: 119176086
NCBI-ProteinID: XP_075732998
Position
X:59713015..59810935
AA seq 1011 aa
MADKENQQAPNQKVGGGPDCLQVGNESPPPEDVTGEKTCDSQDGPKQWDYFPWDRWSRER
STDSRERSVDSRDSATRERDLRYAEERKRDRERGRREEVILYRHRDSETTQSDSTEEEDA
ESSNGSKVKAPTSTTVNESAENKRTFSKEAVPVPLGHTERTEHALAKHTHQKAAKTSKSP
PTSKEASKRMELAKEATEGSTFVANKRNGNADQKGSGDSHSKTSRNGNKGPPIKEARHAV
SDKSSDSETDNARHIGHERRKERRRDANADHKRVDSERRRSDDAHDHQRDTDHQRRQDRG
HDRRRKHDRNRDRDRKENHEQGWRGDQHRRDDHKHNRREGRSESHRDENSRRDDHRSDRD
RNQRDEQKDHHRDDRRDEQREDRRGDSRGDRRRNDRREDRKGDNRDDEQLGDFRTDRGGR
EEPVGQKRVRKSSPDAEAPPRKKDVITGRTGGAYIPPARLRMMQQQITDKSSAEYQRIAW
EALKKSINGLVNKANVGNIDVIIKELMRENLVRGRGLLCRTIMTAQAASPTFTHVYAAMV
AVINTRFPQTGELILKRLVIQFRRSFRRNDKLTCMASVRFIAHLLNQQVAHEVLALEILT
LLLGNSTDDSVEVAVAFLKECGMKLTELTPKGVHAIFERLRSILHEASLDKRVQYMIEVM
FAIRKDGFSAHPSVVKELELVEEESQYTHLLALDDTLDGEDMLNVFKFDPEFIENEERYA
EIAKDILGSDDEDEGSGGEDSNDEEEEEEEQAGENGEIIDNTETNLVALRRTIYLTIQSS
LNFEECAHKLLKLELKPGQVGEMCHMILDCCAQQRTYEKFFGLLAQRFCQLKKDYAEPFE
QIFLSSYDTIHRFETNKLRNVAKFFSHLLFTDAIPWNVLSHIKLTEDDTTSSSRIFIKIL
FQELCEYMGLPKLNERIKDPTLQDAFEGLFPRDLPKNTRFAINFFTSIGLGGLTADLREH
LKSAPKPAPVPDLIAAPPAVSAKKSASSSSDSTSSSSSSDSSSDSDSESSS
NT seq 3036 nt   +upstreamnt  +downstreamnt
atggctgataaagaaaatcaacaagcaccaaaccaaaaagtaggtggaggtcctgactgt
cttcaagtgggaaacgagagccccccgccagaggatgtgaccggtgaaaagacgtgcgac
tcccaagacgggccaaagcaatgggactacttcccatgggatagatggtcacgtgagagg
agcacagactctagggaaaggagtgtggactcgcgtgactcggcaacaagggagagggat
ctacgatatgcagaggaacggaaacgtgaccgtgaacgtggccgccgggaggaggtcatc
ctttaccgtcacagagactctgaaaccacccagagtgatagtaccgaagaggaggacgca
gaaagctcaaatggaagcaaagtgaaggctcccacatcaactactgtgaatgaaagtgca
gaaaacaaaagaacattttcaaaagaagccgttcctgtaccattgggccacactgagcgg
actgagcacgccctggcaaagcacacccatcagaaggcagccaaaacttccaagagtcca
ccaaccagtaaggaagcctcaaagcgcatggagcttgccaaagaggccactgaaggttct
acatttgtggctaacaagagaaatggaaatgctgaccagaaaggatctggtgacagtcac
agcaaaacatcgagaaatggcaacaaaggtccaccaataaaggaggctcgtcatgcagtg
tcagataaaagtagcgactctgaaactgataatgccaggcatatcggccatgagcgaaga
aaagaacgcagacgagacgcaaatgcagaccacaaaagagtcgattctgaaagacggcgc
agtgatgatgctcatgatcaccagcgggatacagatcatcagagaaggcaggataggggc
catgatcggagacggaaacatgacaggaacagagacagggaccgtaaagaaaaccatgag
caaggctggagaggggatcagcacaggagggatgatcacaagcacaaccggagagaaggt
cgcagtgagagccatagagatgagaacagcagaagagatgatcacaggagcgatcgagat
cgcaatcagagggatgaacaaaaagatcatcacagggatgatagaagagatgagcagagg
gaggaccgaagaggcgattcaagaggtgatcgaaggagaaatgatcgaagagaggatcga
aagggcgataatagagatgacgagcaacttggtgattttagaacggaccgtggtggacgg
gaggagccagtggggcaaaagcgagtgcggaaaagttcacctgatgcagaggcaccacca
cggaaaaaggatgtgatcacagggcgcactggtggtgcttacataccaccagcacgcctt
cgcatgatgcaacagcagattacagacaagtccagtgctgaatatcagcgcattgcttgg
gaagcgctgaagaagagcattaatggcttggtaaacaaagcaaacgtgggaaacatagat
gtaataatcaaagagctgatgcgggagaacctcgttcgtggaaggggccttttgtgccgc
acaatcatgactgcccaggcagcgtcacccacctttacccatgtttatgcagcaatggtg
gcagtcataaacactaggtttcctcagaccggggagcttatactaaagagactggtgatc
cagttcagacgatcatttaggcgaaatgacaagctcacgtgcatggcatctgtgcgtttc
attgcacatcttttgaaccagcaagtggcacatgaagtattggccctggaaatcttgaca
ctcctccttggaaactcaaccgatgactctgtggaagtggccgtggcatttctaaaggag
tgcggcatgaaactgactgagctgacgccaaaaggagttcatgctatatttgaacgtttg
agaagcattcttcatgaggccagtttggacaaacgagtgcagtacatgattgaagttatg
tttgctatacgcaaagatggattttctgcccatcccagtgttgtgaaggagcttgaattg
gttgaagaggagagtcaatacacccacttattggctttggatgatacattggacggggaa
gatatgttgaatgtattcaagttcgatccggagttcattgaaaacgaagagagatatgca
gagatcgcaaaagatatattgggcagcgatgacgaagatgaaggttctggaggtgaagat
tctaatgatgaggaggaggaggaagaagaacaagctggagagaatggtgagataatagac
aacactgagactaacctggtggcactcagacggaccatttatttgacaattcagtcgagc
cttaactttgaggaatgtgctcacaagttgctgaagctcgagctcaaacctggacaagtg
ggggaaatgtgccatatgattcttgactgctgtgctcagcagcgcacatacgagaagttt
tttggactgttggctcagcgtttctgccagttgaaaaaggattatgcagagccttttgaa
cagattttcttgagttcatacgacaccattcaccgttttgagacaaacaagctgcgcaat
gttgccaagttcttttctcaccttctcttcacagatgccattccatggaacgttctttct
catatcaagcttaccgaagatgacactacatcatccagccgcatctttatcaagatattg
tttcaagaattatgcgaatacatgggtctaccaaaactgaacgaaagaataaaagatccg
acacttcaagatgcttttgaaggtctgtttccgagagacttgcccaagaacactcggttt
gccattaatttcttcacctctattggccttggaggactgacggctgacctacgcgaacac
ctgaagtctgctccaaagccagcaccagttccagacttgattgctgcacctccagcagtg
tcagcaaagaagtctgcttcatcaagcagtgattccactagtagttcaagtagtagtgac
tccagtagtgactcggacagtgaatccagcagttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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