KEGG   Rattus norvegicus (rat): 108348065
Entry
108348065         CDS       T01003                                 

Name
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05014  Amyotrophic lateral sclerosis
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    108348065
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    108348065
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    108348065
  09165 Substance dependence
   05034 Alcoholism
    108348065
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    108348065
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    108348065
   04131 Membrane trafficking [BR:rno04131]
    108348065
   03036 Chromosome and associated proteins [BR:rno03036]
    108348065
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108348065
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108348065
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108348065
Membrane trafficking [BR:rno04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    108348065
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     108348065
SSDB
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Other DBs
NCBI-GeneID: 108348065
NCBI-ProteinID: XP_003752058
RGD: 11442569
Ensembl: ENSRNOG00000047281
UniProt: A0A0G2QC41
Position
X
AA seq 1152 aa
MTSTGQDSSTRQRKSRHNPQSPLQDSSATLKRGGKKGAVPHSSPNLAEVKKKGKMKKLSQ
PAEEDLIVGLQGLDLNSETRVPVGTGLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLIL
EGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSY
SCACLATGSVLRLVDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKK
HRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQ
GYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPA
GFAHLTHFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAPCASAQ
TSISCTLEALEPFWEVLERSVEPQDEDEVEGDMLEDEEEEGHWEATALPMDTWPLLQNRT
GLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHS
AEYVERLRATEKMKTRDLHREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNG
IAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFE
EDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMGDADYLATWHR
LVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGG
YNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASISEVIQVHRKYWRSLRLMKMED
KEERSSSRLVIKKLPQSASPVSAKGMTTPKGKVLEAGMRKPTAALPTKESTLGQAKAKTA
KALLAQGQSSEQAAKGTTLDLATSKDTVGGATTDQCASVAATENSANQTTSGEEASGETE
SFGTSPSSNASKQTTGASPLHGAAAQQSPELGLSSTLELSSEAQEVQESEEGLLGEAAGG
QDMNSLMLTQGFGDFNTQDVFYAVTPLSWCPHLMAVCPIPAAGLDVSQPCKTCGSVQENW
VCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYLCQAYVHHEDLQDVKNAAH
QNKFGEGMPHLQ
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgacctccaccggccaagattcttctaccaggcagcgaaagagtaggcacaatccccaa
tcgccccttcaggactccagcgccaccttgaagcgtggtgggaagaagggtgctgtaccc
cactccagccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcagccaa
ccagctgaagaagacctaatcgttgggcttcaagggctggatctgaactctgagacaaga
gtaccagttggtactggattggtatttgatgaacagctaaatgacttccactgcctttgg
gatgacagcttccctgaaaaccctgagcggctccatgccatcaaagagcagctgatcctg
gagggcctcctgggccgctgtgtgtcctttcaggcccggttcgccgagaaggaggaactg
atgttggttcacagcctggaatacattgatctgatggagacaacccagtacatgaatgaa
ggagaacttcgagttcttgcaggcacctatgattccgtttatctgcatccgaactcatat
tcatgtgcctgcctagctacaggctctgtcctcaggctggtagatgcagttatgggggct
gagattcggaatggcatggccgtcatcaggcctcctggacaccatgctcagcgcagtctt
atggatgggtattgcatgttcaaccacctggctgtggctgcccgctatgcacaaaagaag
caccgcattcagaggattctcatcgtggactgggatgtgcaccatggtcaaggaacacag
ttcatcttcgaccaggaccccagtgtactctatttctccatccaccgctatgagcatggt
cggttctggccccaccttaaggcttctaactggtccactacaggctttggccaaggccaa
ggatataccatcaatgtaccttggaaccaagtggggatgcgggatgccgactacattgct
gctttcctgcacatcctgctgccagttgcctttgagtttcagcctcaactggtcctggtg
gccgctggatttgatgccctccatggagaccccaagggagagatgtctgccactccagca
ggatttgcccacctgacccatttccttatgggtttggcaggaggcaagttgattctgtct
ctggagggtggctataacctccatgccttggctaagggcgtcagtggctcactccacacc
cttcttggagatccttgccccatgttggagtcccctgttgcaccttgtgcaagcgcccag
acttctatctcctgcactctagaagcccttgaacccttctgggaagtccttgagagatca
gttgagccccaggatgaagatgaagtggaaggagacatgctagaggatgaagaggaggaa
ggccactgggaggccactgctctaccaatggatacatggccactgctccagaaccgcact
gggctggtctatgacgaaagaatgatgagtcactgcaacctgtgggacaatcatcatcct
gagacacctcagcgcatcctacgcatcatgtgtcacctggaggaggtgggccttgcagca
cgctgtctcatcctacctgctcggcctgccctggattctgaactccttacgtgccacagt
gcggagtatgtggaacgtcttcgggccacagaaaagatgaaaactcgggatctgcaccgt
gaaggtgccaactttgagtccatctacatctgccccagcacctttgcctgcgcacagctt
gccacaggcgctgcctgccgcctggtggaagccgtgctttcaggagaggttttgaatggc
attgcaatagtgcgccctccaggacaccatgcggagccagatgctgcttgtggtttctgc
tttttcaattctgtagctgtagctgctcgccatgcccaagtcattgctggacgtgccctg
aggatcctaatcgtggattgggatgttcaccatgggaatggaactcagcacatatttgag
gaagaccccagtgtattatacgtgtccctgcaccggtatgaccgtggtactttcttcccc
atgggggatgagggtgccagtagccaagtagggcgagctgcaggtacaggcttcactgtc
aatgtgccctggaatgggccccgcatgggggatgctgattacctggctacgtggcatcgg
ctggtacttcccatcgcctatgagtttaacccagagctggtgctgatatcagctggcttt
gatgctgcccaaggggacccactgggaggctgccaagtgacacctgagggttatgcccac
ctcacccacctgctgatgggccttgctggtggccgtattattcttattctggagggtggc
tacaacttgacatccatctctgaatctatggctgcctgcacccattccctccttggagac
ccaccaccccagcttacttcgctccgacctccccagtcaggagccctggcttcaatcagt
gaggtcatccaagtgcatcgcaaatactggcgcagtttgcggttaatgaagatggaagac
aaggaagaacgctctagttctaggcttgtcatcaagaagctgccccagtcagctagtcct
gtgtccgctaagggaatgaccacaccaaaaggaaaggttctcgaagcaggcatgaggaag
cccacagcggcattacctacaaaagagtcgactctaggccaggctaaagcaaagacagct
aaggcattgctcgcccagggccagtcctcagaacaagctgctaagggaactacactggat
ctggccacctcaaaggacactgtgggaggtgccacaactgaccagtgtgcttcagtagca
gctacagaaaactcagctaaccagaccacgtcaggggaggaggcttcaggagaaactgag
tcattcggaacttctccatcctcaaatgccagcaagcagaccacaggagcttcacctctg
cacggagccgcagcccagcagtcccccgagcttgggctttccagcactttggagctaagc
agtgaagctcaggaagtccaagaatccgaggagggcctactaggagaagcagctggaggt
caggacatgaacagcttgatgctgacacaaggatttggggactttaatacccaggatgta
ttttatgccgtgactccactatcctggtgtccccacttgatggcggtgtgccccattcct
gcagcaggcctagatgtgtcccaaccttgtaagacctgtggatcggttcaggagaactgg
gtgtgtctgacttgttatcaggtgtactgcagtcgctatgtcaatgcccatatggtctgc
caccatgaagcctctgaacaccctctggtcctcagctgtgttgacctgtctacctggtgt
tacctctgtcaggcctatgtccaccacgaggatctccaagatgtgaagaacgctgcccac
cagaacaagtttggggagggcatgccgcacttgcagtaa

KEGG   Rattus norvegicus (rat): 297453
Entry
297453            CDS       T01003                                 

Symbol
Hdac11
Name
(RefSeq) histone deacetylase 11
  KO
K11418  histone deacetylase 11 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    297453 (Hdac11)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    297453 (Hdac11)
  09165 Substance dependence
   05034 Alcoholism
    297453 (Hdac11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    297453 (Hdac11)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     297453 (Hdac11)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class IV HDACs
     297453 (Hdac11)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 297453
NCBI-ProteinID: NP_001100080
RGD: 1311706
Ensembl: ENSRNOG00000006824
UniProt: B2GUW3
Position
4
AA seq 347 aa
MPHATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGML
VEAREASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGG
TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL
DAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVER
NVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVT
SGGYQKRTARIIADSILNLHDLGLIGPEFPYVPARNSSIPLLSRAVP
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgcctcacgcaacacagctgtaccagcatgtaccagagaaacgctggcccatcgtgtac
tctccacgttacaacatcaccttcatgggcctagagaagctgcacccctttgatgctggg
aaatggggcaaggtgatcaacttcctgaaagaagagaagctgctgtctgatggcatgctg
gtggaggcgagggaggcctcggaggaggacctgctggtggtgcacacaaggcgctatctc
aacgagctgaagtggtcctttgtggtggctaccatcactgagatcccccctgtcatcttt
ctccccaacttccttgtgcagaggaaggtgttgaggcccctgcggacccagactggaggc
accatcatggcggggaagctggctgtggaacgaggctgggccatcaatgttggtggtggc
ttccaccactgctccagtgaccgtggtgggggcttctgtgcctatgcagacatcacactg
gctatcaagttcctgtttgaacgtgtggaaggcatttccagagctaccatcattgatctg
gatgcccaccagggcaatgggcacgagcgagacttcatgggcgacaagcgtgtatatatc
atggatgtttacaaccgccacatctaccccggggatcgctttgctaaagaggccatcagg
cggaaggtggagttggagtggggcacagaagatgaggagtatctggagaaggtggagagg
aatgtgaggaggtccctccaggagcacctgcctgatgttgtggtgtacaacgccggcaca
gacgtcctggagggagaccgccttggcgggctgtccatcagcccagcgggcattgtgaag
agggatgaagtggttttccgggtggtccgagcccatgatatacccatcctcatggtgacc
tcgggtgggtaccagaagcgcacagcccgcattatcgccgactccatcctcaatttgcat
gacctggggctcattgggcctgagtttccctatgtcccggcacggaactcaagcatcccc
ctgctttcccgtgctgtgccttga

KEGG   Rattus norvegicus (rat): 297893
Entry
297893            CDS       T01003                                 

Symbol
Hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
rno04213  Longevity regulating pathway - multiple species
rno04330  Notch signaling pathway
rno04613  Neutrophil extracellular trap formation
rno04919  Thyroid hormone signaling pathway
rno05016  Huntington disease
rno05031  Amphetamine addiction
rno05034  Alcoholism
rno05165  Human papillomavirus infection
rno05169  Epstein-Barr virus infection
rno05200  Pathways in cancer
rno05202  Transcriptional misregulation in cancer
rno05203  Viral carcinogenesis
rno05206  MicroRNAs in cancer
rno05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    297893 (Hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    297893 (Hdac1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    297893 (Hdac1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    297893 (Hdac1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    297893 (Hdac1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    297893 (Hdac1)
   05202 Transcriptional misregulation in cancer
    297893 (Hdac1)
   05206 MicroRNAs in cancer
    297893 (Hdac1)
   05203 Viral carcinogenesis
    297893 (Hdac1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    297893 (Hdac1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    297893 (Hdac1)
   05165 Human papillomavirus infection
    297893 (Hdac1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    297893 (Hdac1)
  09165 Substance dependence
   05031 Amphetamine addiction
    297893 (Hdac1)
   05034 Alcoholism
    297893 (Hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    297893 (Hdac1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     297893 (Hdac1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     297893 (Hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     297893 (Hdac1)
    BRAF-HDAC complex
     297893 (Hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    297893 (Hdac1)
  Chromatin remodeling factors
   NuRD complex
    297893 (Hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 297893
NCBI-ProteinID: NP_001020580
RGD: 1309799
Ensembl: ENSRNOG00000009568
UniProt: Q4QQW4
Position
5
AA seq 482 aa
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
MA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaagaggaaagtctgttactactacgacggggatgttgga
aactactattatggacaagggcacccaatgaagcctcaccgaatccgaatgactcataat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgtcctcacaaagccaac
gctgaggagatgaccaagtaccacagcgacgactacatcaagttcttgcgttctattcgc
ccagacaatatgtctgaatacagcaagcagatgcagagattcaacgtgggtgaggactgt
ccggtatttgatggcttgtttgagttctgtcagttgtccacgggtggctctgtcgcgagt
gctgtgaaactcaataagcagcagacggacatcgctgtgaactgggctgggggcctgcac
catgcgaagaagtctgaagcatccggcttctgttacgtcaatgatattgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgacattcaccatggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tacggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tactacgccgttaactacccactgcgagatggcattgatgatgagtcctatgaagccatc
tttaagccagtcatgtccaaagtaatggagatgttccagcctagtgcagtggtcctacag
tgcggctcagactccctgtctggggatcggctaggttgcttcaatctgaccatcaaagga
catgccaagtgtgtggagttcgtgaagagtttcaacttgccgatgctaatgttgggagga
ggtggctataccatccgtaatgtcgctcggtgctggacttacgagacagctgtggccctg
gacacagagatccctaatgagctaccatacaatgactactttgaatactttggaccagat
ttcaagcttcacatcagcccttccaatatgactaaccagaacactaatgaatacctggag
aagatcaagcagcggctctttgagaacttgagaatgctgccccatgcccctggggtccaa
atgcaggccatcccagaggatgccatcccagaagagagcggtgatgaggatgaggaagac
cctgacaaacgaatttccatctgctcctctgacaaacgcattgcctgtgaggaggaattc
tctgattctgatgaggagggagaaggaggtcgcaagaactcttctaacttcaaaaaagcc
aaaagagtcaaaacagaagatgaaaaagaaaaagatcccgaggagaaaaaagaagtcaca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaagaggtcaag
atggcctga

KEGG   Rattus norvegicus (rat): 362981
Entry
362981            CDS       T01003                                 

Symbol
Hdac10
Name
(RefSeq) polyamine deacetylase HDAC10
  KO
K18671  histone deacetylase 10 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    362981 (Hdac10)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    362981 (Hdac10)
  09165 Substance dependence
   05034 Alcoholism
    362981 (Hdac10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362981 (Hdac10)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     362981 (Hdac10)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     362981 (Hdac10)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 362981
NCBI-ProteinID: NP_001030172
RGD: 1305874
Ensembl: ENSRNOG00000031915
UniProt: Q569C4
Position
7
AA seq 588 aa
MGTALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCQCLSVCEASEEEL
GLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTG
AVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQ
YIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLA
AFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICAV
LECPGVYPECSDSPDPSLDKPPTNSTCTVAEDSLSPCLDRPCHRPTPPICIAVALAVSGA
ALDLPPGVLHQEGSALREETEAWARLHKSQFQDDDLAALGKSLCLLDGILDGQIRSAIAT
TTALATAATLGVLIQRCVAHRGQRRILWLSIRGKEADIWSMFHFSTPLPQTTGGFLSFIL
GLVLPLAYGFQPDMVLMALGPAHGLQNAQAALLAAMLRSPVGGRILALVEEESILQLART
LAQVLHGETPPSLGPFSMASPEEIQALMFLKAQLEPRWKLLQVAAPPP
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgggcacagcacttgtgtaccacgaggacatgacagccacccgactgctctgggatgac
cctgagtgcgaaattgagtgcccagagcgcctgacagctgccttggatggcctgcggcag
cgtggcctggaagaaaggtgccagtgtttgtcagtttgtgaggcatcagaggaagagttg
ggactggtgcacagcccagaatatatagccctggtgcagaagacccagaccctggacaaa
gaggagctccacacactgtctaagcagtatgatgctgtctacttccacccggatactttt
cactgtgcaaggctggcagcgggggctgcactgcggctggtggatgctgtgctaacagga
gctgtgcacaatggcgttgccctggtgaggcctccagggcaccatagtcagagggcggct
gccaatggcttctgtgtgttcaacaacgtggctatagcagccagacatgccaagcagaaa
tacgggctgcagaggattctcattgtcgactgggatgtccaccatggccagggcatccag
tatatctttgaggatgaccccagtgtcctttatttctcctggcaccgctatgagcatgga
aacttctggccgttcctcccagagtctgatgcagacacagttggccgagggcggggccaa
ggtttcactgtcaatttgccctggaaccaggttgggatgggaaatgctgactatttggct
gccttcctgcatgtgctgctcccgttggcctttgagtttgaccctgagctggtgctggtg
tcagctggattcgactctgctattggggaccctgaggggcagatgcaggccacccctgag
tgctttgcccatcttacacagctgctacaggtgctggctggtggccggatttgtgctgtg
ttggagtgccctggagtctatccagagtgttcggacagcccagacccctcactggacaag
cctccaacaaattccacatgtacagtagcagaggattcactgagcccctgcctggacaga
ccgtgccaccgccctacgcccccaatctgcatagctgttgccttggctgtgtcaggtgct
gccctggacttacctcctggagtgctccatcaagaagggtcagccttgagggaggagacc
gaggcatgggccaggcttcacaagtcccagtttcaggacgacgatcttgccgcactgggg
aagagtctgtgcctcttagatggaatcctggatgggcagataagaagtgctatagcaacc
acaactgcccttgccacagcagcaactttgggtgtgctcattcagcgatgtgtagcccat
agaggtcagaggagaattctgtggctcagcatccggggcaaggaggcagacatctggtcc
atgttccacttctccactccactgccacagacaactggagggtttctgagcttcatcttg
ggtctggtactgcccttagcctatggcttccagcctgacatggtgttgatggccctgggg
cccgcccatggcctgcagaatgcccaagctgctctcttggctgcaatgcttcggagccca
gtagggggccgaattctagctttagtggaagaggaatccatactccagcttgcaagaacc
ctggcacaggtattgcatggagaaacacctcccagtctgggccctttctcgatggcatct
ccagaggagatccaggcccttatgtttctaaaagctcagctggagcctcggtggaagttg
ctgcaggtggctgctcctccaccataa

KEGG   Rattus norvegicus (rat): 363287
Entry
363287            CDS       T01003                                 

Symbol
Hdac4
Name
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04371  Apelin signaling pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    363287 (Hdac4)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    363287 (Hdac4)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    363287 (Hdac4)
   05203 Viral carcinogenesis
    363287 (Hdac4)
  09165 Substance dependence
   05034 Alcoholism
    363287 (Hdac4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    363287 (Hdac4)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     363287 (Hdac4)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     363287 (Hdac4)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 363287
NCBI-ProteinID: NP_445901
RGD: 619979
Ensembl: ENSRNOG00000020372
UniProt: Q99P99
Position
9
AA seq 1077 aa
MSSQSHPDGLSGRDQPVELLNPARVNHMPSTVDVATALPLQVAPAAVPMDLRLDHQFSLP
LEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAM
KHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLN
KKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFPL
RKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVATALKKRPLDVTDSACSSAPGSGPS
SPNSSSGNVSTENGIAPTVPSTPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPAT
GPAAGAAGQQDAERLALPALQQRISLFPGTHLTPYLSTSPLERDGGAAHNPLLQHMVLLE
QPPTQTPLVTGLGALPLHTQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLV
IQQQHQQFLEKHKQQFQQQQLHLSKMISKPSEPPRQPESHPEETEEELREHQALLDEPYL
DRLPGQKEPSLAGVQVKQEPIESEEEEVEATREAEPSQRPATEQELLFRQQALLLEQQRI
HQLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLM
LKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLL
YGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVAT
GELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGT
QQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEY
LAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGR
IVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSMEKVMGIHSEY
WRCLQRLSPTVGHSLIEAQKCENEEAETVTAMASLSVGVKPAEKRSEEEPMEEEPPL
NT seq 3234 nt   +upstreamnt  +downstreamnt
atgagctcccaaagccatccagatggactttctggccgagaccagcctgtggagctgctg
aatcctgcccgcgtgaaccacatgcccagcacggtggacgtggctacagcgctgcctctg
caggtggcccctgcagcagtacccatggacctgcgcttggaccaccagttctcactgccc
ttggaacctgcactgcgggagcagcaactgcagcaggaactcctagcactgaagcagaag
cagcagatccagcggcagatcctcattgcagagttccagcgtcagcatgagcagttgtcc
cgacagcatgaggcacagctgcatgaacatatcaagcagcagcaggagatgctggccatg
aagcaccagcaggagctgctggagcaccagcggaaactggagcggcaccggcaagagcag
gagctggagaagcagcaccgtgagcagaagctgcagcagctcaagaacaaggagaagggc
aaagagagtgctgtggcgagcacagaggtgaagatgaagctgcaggagtttgttctcaac
aagaagaaggctctggcccaccggaacctgaaccactgcatgtccagcgacccccgctac
tggtatgggaagacacagcacagctcccttgaccagagctctccaccccagagtggggtg
tcagcctcctacaaccaccctgtcttgggaatgtacgacgccaaagatgacttccctctt
aggaaaacagcttctgaacctaacctgaaattacggtcaaggcttaagcagaaagtagct
gagagacggagcagccccctgctgcgcaggaaagatggccctgtggccactgctctaaaa
aagcgacccctggatgttacagactccgcatgtagcagcgcccctggctccggtcccagc
tcccccaatagcagctctggcaacgtcagcaccgagaatggcattgcacccaccgtgccc
agcactccagctgagacgagcttggcacacagacttgtgactcgagaaggctctgttgcc
ccacttcctctctatacatcaccatccttgcccaacatcaccctgggacttcctgccact
ggccctgctgctggtgcagcaggccagcaggatgctgagaggcttgctctcccagccctc
cagcagcgaatctccttgttccctgggacccacctcaccccatacctgagcacctcgccc
ctggagcgggacggtggagcagctcacaaccccctcctgcagcacatggtcctgctggag
cagccacccacccagacgccccttgtcacaggcctgggggcactgcccctccacacacag
tccctggttggtgcggacagggtgtccccatccattcacaagctgcggcagcaccgacct
ctggggcgcacgcagtcagcacccctgccgcagaacgcacaggccctgcagcacctggtg
atccagcagcagcaccagcagtttctggagaagcacaagcaacagttccagcagcagcag
ctgcacctcagcaagatgatttctaaacccagtgagccacctcggcagcctgagagccac
ccggaggagacagaggaggagctccgtgaacaccaggccttgctggatgagccctaccta
gatcggctccctgggcagaaggagccctccttagctggtgtgcaggtgaagcaggagccc
atcgagagtgaggaggaagaagtagaggccactcgagaggcggaacccagccagcgccca
gccactgaacaggagcttctctttagacagcaagctcttctgctggagcagcagaggatc
caccagttaaggaactaccaggcatctatggaggctgctggcatccctgtgtcatttggc
agccacagacctctgtctcgcgcacagtcctccccagcatctgccaccttccccatgtca
gtccaggagccccccaccaaaccaaggttcaccacaggccttgtgtatgacacactcatg
ttgaagcaccagtgcacctgtgggaacaccaacagccacccggagcatgctgggaggatc
cagagcatctggtcccgcctgcaggagactggcctccgtggcaagtgtgagtgcatccgc
ggacgcaaggccacactggaagagctgcagacagtgcactcggaggcccacacactcctc
tatggcacaaaccctctcaacagacagaaactggacagctcgctgacctccgtgtttgtc
aggcttccttgtggtggtgttggggtggatagtgataccatatggaatgaggtgcactcg
tctggggcagcccgcctggctgtaggctgtgtagtggagctggtcttcaaggtggccacg
ggagagctaaagaatggctttgctgtggttcgtcccccaggacaccatgccgaggagagt
acacccatgggtttctgctactttaattctgtggcaattgcagccaaacttctccagcag
aggttgaatgtgagcaagatcctcattgtagactgggatgtgcaccatgggaatgggacc
cagcaggccttctacaatgaccccaatgttctctacatgtccctgcaccgctatgacgat
gggaacttcttcccaggaagtggagcaccagatgaggtgggcacagggccaggcgtgggt
ttcaatgtcaacatggccttcacgggtggcctcgatccccccatgggagacgccgagtac
ctggcagccttcagaacggtggtcatgccaatcgcaaatgagtttgccccagatgtggta
ctggtgtcctcgggcttcgatgctgtggagggccaccccacacctcttggagggtacaat
ctctctgccaaatgtttcgggtacttgacaaaacagctgatgggcttagctggtggccgg
atcgtgctggccctggagggaggccatgacctgacagccatctgtgatgcttctgaagca
tgtgtttctgctctgctgggaaatgagcttgagcctctgccagaaaaggttctacatcag
agacccaatgccaatgccgtccactccatggagaaagtgatgggcatccacagtgagtac
tggcgctgcctgcagcgtttgtcccccactgtggggcactctctgattgaggcgcagaag
tgtgagaatgaagaagctgagacagtcaccgccatggcctcgctgtctgtaggcgtcaaa
cctgctgagaagagatctgaggaggagcccatggaggaggagccaccactgtag

KEGG   Rattus norvegicus (rat): 363481
Entry
363481            CDS       T01003                                 

Symbol
Hdac8
Name
(RefSeq) histone deacetylase 8
  KO
K11405  histone deacetylase 8 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    363481 (Hdac8)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    363481 (Hdac8)
  09165 Substance dependence
   05034 Alcoholism
    363481 (Hdac8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    363481 (Hdac8)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     363481 (Hdac8)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     363481 (Hdac8)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 363481
NCBI-ProteinID: NP_001119845
RGD: 1562895
Ensembl: ENSRNOG00000003122
Vega: OTTRNOG00000000658
UniProt: B1WC68
Position
X
AA seq 377 aa
MEIPEEPANSGHSLPPVYIYSPEYVSICDSLVKVPKRASMVHSLIEAYALHKQMRIVKPK
VASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAIGGGTI
TAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLH
HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKY
YHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLI
LGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPH
RIQQILNYIKGNLKHVV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggagataccagaggaacccgccaatagtgggcattcgctacccccggtttatatttac
agtcccgagtatgtcagcatctgcgattcccttgtgaaggtccccaaacgggccagtatg
gttcactctctgatcgaagcatatgccctgcataaacaaatgaggatagtgaagcccaaa
gtggcctccatggaggagatggccaccttccacactgatgcctatcttcaacatctccag
aaggtcagccaagaaggggatgaggaccatccagactccatagaatatggactaggttat
gactgcccagccacagaagggatatttgactatgcagcagctataggaggaggtacaatc
acagctgcccagtgcctgattgacgggaagtgtaaagtagccattaactggtctggaggg
tggcatcatgcaaagaaagatgaagcatctggtttctgttatctcaatgatgctgtccta
ggaatattacgattgcgacggaaatttgaccggattctctatgtggacttggatctacac
catggagatggtgtagaagatgccttcagttttacatctaaagttatgactgtgtccctg
cacaagttctctccaggatttttcccaggaacaggtgacatgtctgatgttggcctgggg
aaaggacggtactacagtgtcaatgtgcccattcaggatggcatccaggatgagaagtac
tatcacatctgtgaaagtgtactaaaggaagtataccaggccttcaatccgaaggcagtg
gttctacagctgggagcagataccattgctggagatccaatgtgctcctttaacatgaca
ccagtgggaattggcaagtgtctgaagtatgtccttcagtggcagttggcaactctgatt
ttaggaggaggaggctacaaccttgccaacacggctcgttgctggacatacttgaccggg
gtcatcctagggaaaacactatcctctgagatcccagatcatgagtttttcacagcatat
ggtcctgattatgtgctggaaatcacgccaagctgccggccagaccgcaatgagccccat
cgaatccagcaaatcctcaactacatcaaagggaatctgaagcatgtggtctag

KEGG   Rattus norvegicus (rat): 687001
Entry
687001            CDS       T01003                                 

Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    687001 (Hdac9)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    687001 (Hdac9)
  09165 Substance dependence
   05034 Alcoholism
    687001 (Hdac9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    687001 (Hdac9)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     687001 (Hdac9)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     687001 (Hdac9)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 687001
NCBI-ProteinID: NP_001186974
RGD: 1310748
Ensembl: ENSRNOG00000004158
UniProt: E5RQ38
Position
6
AA seq 1068 aa
MHSMISSVDVKSEVPMGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVGRHPKLWY
TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDTKDDFPLRKTASEPNLKVRSRLKQKVAER
RSSPLLRRKDGNLVTSFKKRVFEVAESSVSSSSPGSGPSSPNNGPAGNVTENEASVLPPT
PHPEQLVPQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSPLSASNSLKDKQKCETQM
LRQGVPLPGQYGSGIAASSSHAHVAMEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPL
HPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQY
QQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMEERATSKDSGTGKDSSACVEDTL
GQVGAVKVKEEPVDSDEDAQMQEMECGEQAAFMQQTPLLESSHTRALSVHQARLAAAGID
GLEKHGLLSRTHSSPAPSMSPHPAADCPRQPASATGIAYDCLMLKHQCICGNSTTHPEHA
GRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRTLL
GDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVR
PPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSIL
YISLHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPV
AREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLANGRVALALEGGHDL
TAICDASEACINALLGNEPGSLEEDVLHQSVNTNAAASLQKTIEIQSKYWKSIKMVAVAR
GCALPASQLQEETETVSALASLTVDVEQPFAQEDGRTAGEPMEEEPAL
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgcacagtatgatcagctcagtggacgtgaaatcagaggttcctatgggactggagccc
atctcacctttagacctaaggacagacctcaggatgatgatgcctgtggtggatcctgtc
gtccgcgagaagcaactgcagcaagagttacttcttatccaacagcagcagcaaatccag
aagcagctcctgatagccgagtttcagaagcagcacgagaatttgacaaggcagcatcaa
gcacaacttcaggagcacatcaagttacaacaggaacttctagccataaaacaacagcaa
gaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagagagg
catcgcagagagcagcagcttcctcctctcagaggcaaagatagaggacgagaaagggcg
gtggcaagcacagaggttaagcagaagcttcaagaattcctattgagtaaatcagcaacg
aaagacactccaaccaatggaaagaatcattccgtgggccgccatcccaagctctggtac
acggctgcccaccacacatcactggatcaaagctctccacccctcagtggaacgtctcca
tcctacaaatacacattaccaggagcccaagataccaaggatgatttccccttgcgaaaa
acagcctcagagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagagagg
agaagcagccccttactcaggcggaaggatggaaatcttgtcacttcattcaagaagcga
gtgtttgaggtggcagaatcctcggtcagtagcagctctccagggtcaggtcccagttca
ccaaacaatgggcctgctggaaatgttaccgaaaacgaggcttcagttctgcctcccacg
cctcaccccgagcagctggttccacagcagcgcattctgattcacgaagattccatgaac
ctgctgagtctctacacctccccgtccctgcccaatatcaccctgggacttccagcagtg
ccatccccactcagtgcttctaattccctcaaagacaagcagaagtgtgagacacagatg
ctcagacaaggtgtccctctgcccggccagtatggaagtggcattgcagcatcctccagc
catgctcatgtagcaatggagggcaaaccgaacagcagtcaccaagctctcctgcagcac
ctcctgctgaaggaacaaatgagacagcaaaagcttcttgtggctggcggagttccatta
cacccccagtctcctttggcaacaaaagaaagaatttcaccaggcattagaggtacccac
aaattgccccgccacagacccctcaatcgaactcagtctgcacctttgcctcagagcaca
ctggctcagctggtcattcagcagcagcaccagcagttcctggagaagcagaagcaatac
cagcagcagatccacatgaacaaactgctatcgaaatctattgagcaactgaagcaacca
ggcagccatcttgaagaggcagaggaggagcttcagggggaccaagccatggaagagaga
gcaacgtctaaggacagcggtaccgggaaggacagcagtgcttgtgtggaggacacactg
ggacaagttggggctgtgaaggtcaaggaggaacccgtggacagcgacgaagatgctcag
atgcaggaaatggaatgtggggagcaggctgcttttatgcaacagacgcccttgctggag
tcctcacacacgcgtgcactctcagtgcaccaggctcggctggctgcagctggcatcgat
ggattagagaaacatggactcctctccaggacccattcttctcctgcaccctccatgtca
cctcacccagccgcagactgtccccgccagcctgcctctgccactggaattgcctatgac
tgtctgatgctgaaacaccagtgcatctgtggcaattccaccacccaccctgagcatgct
gggcgaatacagagcatctggtcacggctgcaagaaaccgggctgctaaataaatgtgag
cgaattcaaggtcgaaaagccagcctggaggaaattcagcttgttcattctgaacatcac
tcactactgtatggcaccagccccctggacggacagaagctggaccccaggacactccta
ggtgatgattctcgaaaattcttttcctcgttaccttgtggtggactcggggtggacagt
gacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggctgtgtc
attgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgttgtgagg
cccccaggccatcatgctgaagaatctgcagccatggggttctgcttttttaattcagtc
gcaattacggccaaatacttgagagaccaactaaatataagcaagatattgatcgtagat
ctggatgttcaccatggaaacggtacacagcaggccttttatgctgaccccagcatcctg
tacatttcactccatcgctatgatgaagggaactttttccctggcagtggcgccccgaat
gaggttggagtaggtctgggagaaggctacaatgtaaacattgcctggacaggcggcctt
gacccccctatgggagatgttgagtaccttgaagcattcaggactgtcgtgatgcctgtg
gccagagagtttgatccagacatggtcctggtttctgctggatttgatgcattggaaggc
cacacccctcccctagggggttacaaagtgacagcaaaatgctttggtcatttgacgaag
cagctgatgacattggctaatggacgtgtggcattggctcttgaagggggacatgatctg
acagccatctgtgatgcctcggaggcctgcataaatgcccttctaggaaatgagcccggg
tctcttgaggaagatgttctccaccagtctgtgaatacgaatgcagccgcttctttacag
aagaccattgaaatccaaagcaagtattggaagtcgatcaagatggtggctgttgcaagg
ggctgtgctctgcctgcttctcagctgcaagaggagacagagaccgtttctgcattagcc
tccctgacggtagatgtggaacagccatttgctcaggaagatggcagaactgctggtgag
cccatggaagaggagccagccttgtga

KEGG   Rattus norvegicus (rat): 84576
Entry
84576             CDS       T01003                                 

Symbol
Hdac1l
Name
(RefSeq) histone deacetylase 1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
rno04213  Longevity regulating pathway - multiple species
rno04330  Notch signaling pathway
rno04613  Neutrophil extracellular trap formation
rno04919  Thyroid hormone signaling pathway
rno05016  Huntington disease
rno05031  Amphetamine addiction
rno05034  Alcoholism
rno05165  Human papillomavirus infection
rno05169  Epstein-Barr virus infection
rno05200  Pathways in cancer
rno05202  Transcriptional misregulation in cancer
rno05203  Viral carcinogenesis
rno05206  MicroRNAs in cancer
rno05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    84576 (Hdac1l)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    84576 (Hdac1l)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    84576 (Hdac1l)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    84576 (Hdac1l)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    84576 (Hdac1l)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    84576 (Hdac1l)
   05202 Transcriptional misregulation in cancer
    84576 (Hdac1l)
   05206 MicroRNAs in cancer
    84576 (Hdac1l)
   05203 Viral carcinogenesis
    84576 (Hdac1l)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    84576 (Hdac1l)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    84576 (Hdac1l)
   05165 Human papillomavirus infection
    84576 (Hdac1l)
  09164 Neurodegenerative disease
   05016 Huntington disease
    84576 (Hdac1l)
  09165 Substance dependence
   05031 Amphetamine addiction
    84576 (Hdac1l)
   05034 Alcoholism
    84576 (Hdac1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    84576 (Hdac1l)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     84576 (Hdac1l)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     84576 (Hdac1l)
   HDAC complexes
    Sin3A-HDAC complex
     84576 (Hdac1l)
    BRAF-HDAC complex
     84576 (Hdac1l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    84576 (Hdac1l)
  Chromatin remodeling factors
   NuRD complex
    84576 (Hdac1l)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 84576
NCBI-ProteinID: NP_445898
RGD: 619975
Ensembl: ENSRNOG00000013695
UniProt: D3ZVU7
Position
9
AA seq 484 aa
MAQTQGTERKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHYAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYE
AIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLML
GGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEY
LEKIKQRLFENLRMLPHTPGVQMQAIPEDAIPEESGDEDEEDPDKPISICSSDKCIACEE
EFPDSDEEGEGGRENSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEE
VKMA
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccgagaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaagggcacccaatgaagcctcaccgaatccgaatgactcataat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgtcctcacaaagccaac
gctgaggagatgaccaagtaccacagcgacgactacatcaaattcttgcgttctattcgc
ccagacaatatgtctgaatacagcaagcagatgcagagattcaacgtgggtgaggactgt
ccagtatttgatggcttgtttgagttctgtcagttgtccacgggtggctctgtcgcgagt
gctgtgaaactcaataagcagcagacggacatcgctgtgaactgggctgggggcctgcac
tatgcaaagaagtctgaagcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaacttctaaagtaccaccagagggtgctgtatattgacattgatattcaccatggc
gatggcgatggcgtggaagaggccttctatactacagaccgggtcatgactgtgtccttt
cataaatacggagagtacttcccaggaactggggacctacgggatattggggctggcaaa
ggcaagtactacgccgttaactacccactgcgagacggcattgatgatgagtcctatgaa
gccatcttcaagccagtcatgtccaaagtaatggagatgtttcagcctagtgcagtggtc
ctacagtgcggctcagactccctgtctggggatcggctaggttgcttcaatctgaccatc
aaaggacatgccaagtgtgtggagttcgtgaagagtttcaacttgccaatgctaatgttg
ggaggagatggctataccatccataatgtcgctcggtgctggacttacgagacagctgtg
gccctggacacagagatccctaatgagctaccgtacaatgactactttgaatactttgga
ccagatttcaagcttcacatcagcccttccaatatgactaaccagaacactaatgaatac
ctggagaagatcaagcagcggctctttgagaacttgagaatgctgccccatacccctggg
gtccaaatgcaggccatccctgaggatgccatcccagaagagagcggtgatgaggatgag
gaagaccctgacaaaccaatttccatctgctcctctgacaaatgcattgcctgtgaggag
gaattccctgattctgatgaggagggagaaggaggtcgagagaactcttctaacttcaaa
aaagccaaaagagtcaaaacagaagatgaaaaagaaaaagatcccgaggagaaaaaagaa
gtcacagaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaagag
gtcaagatggcctga

KEGG   Rattus norvegicus (rat): 84577
Entry
84577             CDS       T01003                                 

Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
rno04213  Longevity regulating pathway - multiple species
rno04330  Notch signaling pathway
rno04613  Neutrophil extracellular trap formation
rno04919  Thyroid hormone signaling pathway
rno05016  Huntington disease
rno05031  Amphetamine addiction
rno05034  Alcoholism
rno05165  Human papillomavirus infection
rno05169  Epstein-Barr virus infection
rno05200  Pathways in cancer
rno05202  Transcriptional misregulation in cancer
rno05203  Viral carcinogenesis
rno05206  MicroRNAs in cancer
rno05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    84577 (Hdac2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    84577 (Hdac2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    84577 (Hdac2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    84577 (Hdac2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    84577 (Hdac2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    84577 (Hdac2)
   05202 Transcriptional misregulation in cancer
    84577 (Hdac2)
   05206 MicroRNAs in cancer
    84577 (Hdac2)
   05203 Viral carcinogenesis
    84577 (Hdac2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    84577 (Hdac2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    84577 (Hdac2)
   05165 Human papillomavirus infection
    84577 (Hdac2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    84577 (Hdac2)
  09165 Substance dependence
   05031 Amphetamine addiction
    84577 (Hdac2)
   05034 Alcoholism
    84577 (Hdac2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    84577 (Hdac2)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     84577 (Hdac2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     84577 (Hdac2)
   HDAC complexes
    Sin3A-HDAC complex
     84577 (Hdac2)
    BRAF-HDAC complex
     84577 (Hdac2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    84577 (Hdac2)
  Chromatin remodeling factors
   NuRD complex
    84577 (Hdac2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 84577
NCBI-ProteinID: NP_445899
RGD: 619976
Ensembl: ENSRNOG00000000604
UniProt: F7ENH8 B1WBY8
Position
20
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKEAEDKRTDVKEEDKSKDNSGEKTDTKGA
KSEQLNNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcaaggaggcggcaagaagaaagtgtgctactattatgacggtgatatc
gggaattattattacggccagggtcatcccatgaagccccataggatccggatgactcat
aacttgcttctaaattatggtttataccgaaaaatggaaatatataggcctcataaggcc
actgctgaagaaatgacaaaataccacagtgatgagtatatcaagtttctacgatcaata
aggccagataacatgtcagagtatagtaagcagatgcagagatttaatgtcggagaagac
tgtccagtgttcgatggactctttgagttttgtcagctctccaccggtggctcagttgct
ggggccgtgaagctgaaccgtcaacagactgacatggctgtcaactgggcgggaggactg
caccacgccaagaagtcagaggcctcaggattctgctacgttaatgacattgtgcttgct
gtcctcgagctactgaaatatcatcagagagtcttatatattgacatagacatccaccat
ggtgatggtgttgaggaagctttttatacaacagatcgcgtgatgaccgtctcattccat
aaatacggagaatactttcctggaacaggagacttgagggatattggtgctggaaaagga
aagtactacgctgtcaactttcccatgagggacggtatagatgacgagtcatatggacag
atatttaagcctataatctcaaaagtgatggagatgtaccagccgagcgcggtggtgctg
cagtgtggcgctgactccctctctggtgacaggctgggctgcttcaacctaactgtcaaa
ggtcacgctaaatgtgtagaagtagtgaaaacttttaacttgccgttgctgatgcttggc
ggaggtggctacacaatccggaatgttgctcgatgttggacgtatgagactgcagttgcc
cttgattgtgaaattcccaatgagttgccatataatgattacttcgagtattttggacca
gacttcaaactgcatattagtccctcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatctgcgaatgttaccacatgcgcctggtgtt
caaatgcaagctattccagaagatgctgttcatgaagacagtggtgatgaggatggagaa
gaccctgacaagagaatttctattcgagcatcagacaagcggatagcttgtgatgaagag
ttctcagattctgaggatgaaggtgaaggaggtcgtaggaatgtcgctgatcataagaag
ggagccaaaaaagccaggattgaggaagacaagaaggaggcggaggacaagaggacagat
gttaaggaagaagacaaatccaaggacaatagtggtgagaaaacagacaccaaaggagcc
aaatcagaacaactcaacaacccttga

KEGG   Rattus norvegicus (rat): 84578
Entry
84578             CDS       T01003                                 

Symbol
Hdac3
Name
(RefSeq) histone deacetylase 3
  KO
K11404  histone deacetylase 3 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno04919  Thyroid hormone signaling pathway
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    84578 (Hdac3)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    84578 (Hdac3)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    84578 (Hdac3)
  09165 Substance dependence
   05034 Alcoholism
    84578 (Hdac3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    84578 (Hdac3)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     84578 (Hdac3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     84578 (Hdac3)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 84578
NCBI-ProteinID: NP_445900
RGD: 619977
Ensembl: ENSRNOG00000019618
UniProt: Q6P6W3
Position
18
AA seq 428 aa
MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR
FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN
KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI
SQVVDFYQPXCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV
RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ
TIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDN
DKESDVEI
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggccaagaccgtggcgtatttctacgaccccgatgtgggcaacttccactacggagct
ggacacccgatgaaaccccatcgcctggcattgactcatagcctagtcctgcattatggt
ctctataagaagatgatcgtcttcaagccttaccaggcctcccagcatgacatgtgccgc
ttccattctgaggactacattgacttcctgcagagagtcagccccaccaatatgcagggt
ttcaccaagagccttaatgccttcaacgtgggtgacgactgccctgtgtttcccgggctc
ttcgagttctgctcccgctatacaggcgcatctctgcaaggggcaacacagctaaacaat
aagatctgtgatattgccatcaactgggctggtggtctacatcatgccaagaagtttgag
gcctctggcttctgctatgtcaatgacatagtaattggtatcctggagctgctcaagtac
caccctcgggtgctgtacattgatattgacatccaccatggtgacggggttcaggaagcc
ttctacctcactgaccgggtcatgactgtgtccttccacaaatatggaaattacttcttt
cctggaacaggtgatatgtatgaagttggagcagagagtggccgctactattgtctcaat
gtgcccttacgggatggcattgatgaccagagttacaagcaccttttccagccggtcatc
agccaggtggtggacttctatcagccganctgcatcgtgctgcagtgtggcgctgactcc
ctgggctgtgatcgattaggctgcttcaatctcagcattcgaggacatggggaatgtgtt
gaatatgtcaagagtttcaatatccctctcctggtgctgggaggtggtggttacaccgtc
cgaaatgttgcccggtgctggacatatgaaacatctctgctggtagaagaggccattagt
gaggaacttccctatagtgaatacttcgagtactttgccccagatttcacgctccatcca
gatgtcagcacccgcatcgagaatcagaactcacgccagtatctagaccagatccgccag
accatctttgaaaacttgaagatgctgaaccatgcacccagtgtccagattcatgatgtt
ccagcagatctcctgacctatgacaggactgacgaggccgatgctgaagagaggggtcct
gaggagaactacagcaggccagaagcacccaatgaattctatgatggagaccatgacaat
gacaaggaaagcgatgtggagatttaa

KEGG   Rattus norvegicus (rat): 84580
Entry
84580             CDS       T01003                                 

Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04371  Apelin signaling pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    84580 (Hdac5)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    84580 (Hdac5)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    84580 (Hdac5)
   05203 Viral carcinogenesis
    84580 (Hdac5)
  09165 Substance dependence
   05034 Alcoholism
    84580 (Hdac5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    84580 (Hdac5)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     84580 (Hdac5)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     84580 (Hdac5)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 84580
NCBI-ProteinID: NP_445902
RGD: 619980
Ensembl: ENSRNOG00000020905
Position
10
AA seq 1113 aa
MNSPNESDGMSGREPSLEILPRTPLHSIPVAVEVKPVLPAAMPSSMGGGGGGSPSPVELR
GALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQ
QEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQE
FLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSR
DDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSS
VCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSL
PNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGSTLTGKFMSTSSIPGCLLG
VALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPR
HRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHP
EETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEEDEEEDEEDCIQVKDEDGES
GPDEGADLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKS
PTDHPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCER
IRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSD
TVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVA
ITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEE
VGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH
LSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQP
LDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFATGLGCSLREAQTGEKEEAETVSAM
ALLSMGAEQAQAAATQEHSPRPAEEPMEQEPAL
NT seq 3342 nt   +upstreamnt  +downstreamnt
atgaactctcccaacgagtcggatggcatgtcaggccgggaaccatccttggaaatcttg
ccacggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgccagca
gccatgcccagctccatgggaggtggaggtggaggtagccccagccctgtggagcttcgg
ggggctctggcaggccccatggaccccgcgcttcgggagcagcaactgcagcaagagctc
ctggtgctcaagcagcagcagcagctgcaaaagcagctcctgtttgccgagtttcagaag
cagcacgaccacctgacgcggcagcatgaagtccagctgcagaagcacctcaagcagcag
caggagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgcgagcag
cagcggcaagaggagctagagaaacagcggctggagcagcagctgcttattctacgaaac
aaggagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaa
ttcctgttgtccaagtcaaaggagcccacaccaggcggcctcaaccattccctcccacag
caccccaaatgctggggagcccatcatgcttctttggaccagagttcccctccccagagc
ggccctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgt
gatgactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcaaggcta
aaacagaaggtagctgagagaagaagcagtcccctcctgcgtcgaaaggatggcactgtt
attagtacttttaagaagagagcagtcgagatcacaggcacagggcctggggtgtcgtcc
gtgtgtaacagtgcgcctggctctggccccagctctcccaacagttcccacagcaccatc
gctgagaacggctttactggctcagtccccaacatccccactgagatgctcccccagcac
cgggccctccctctggacagttccccaaaccagttcagcctctacacgtctccttctctg
cctaacatctccctagggctgcaggccactgtcactgttaccaactcgcacctcaccgcc
tccccgaagctgtcgacacagcaggaggctgagaggcaggcccttcagtccctgcggcag
ggcagcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgctggga
gtggccctggagggcgacacgagcccccatgggcacgcttccctgctgcagcacgttttg
ctgctggagcaggcccggcaacagagcacgctcatagcggtgccactccatgggcagtcc
ccactggtgacgggtgaacgtgtggccaccagcatgaggacagtgggcaagctcccaagg
caccgacctctgagccgtactcagtcctcgcccctgccgcagagtccccaggccctgcag
cagctggttatgcagcagcagcaccagcagttcctagagaaacagaagcagcagcagatg
cagctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccacccaccct
gaagagacagaggaggagctgacggaacagcaggaggccttgctgggggagggggccctg
accatgccccgggaaggttctacagagagcgagagcacccaggaagatctagaagaggaa
gaggatgaggaggaggacgaggaggactgcattcaggtcaaggatgaggatggcgagagt
ggtcctgatgagggcgcagacttggaggagtccagtgctggttacaaaaagttgttcgca
gatgcccagcagttacagcccctccaggtataccaggcacccctcagcctggccactgtg
cctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagc
cccacagaccaccccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacg
ttcatgctgaagcatcagtgtatgtgcggaaacacacatgtgcacccagagcacgccggc
cgcatccagagcatctggtcccggctgcaggaaactggtctgctcagcaagtgtgagcgg
atccggggtcgtaaagccacactggatgaaatccagaccgtgcactctgagtaccacacc
ctgctctatgggaccagtccccttaaccggcagaagctggacagtaagaagctgcttggc
cccatcagccagaagatgtacgccatgctgccttgtgggggcattggggtggacagtgac
actgtgtggaatgagatgcactcctctagtgccgtgcgaatggcagtgggctgcctggtg
gagctggccttcaaggtggctgcaggagagctcaagaatggatttgccatcatccgaccc
ccaggacatcatgctgaggagtccacagccatgggattctgcttcttcaactccgtagcc
atcacagctaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggactgg
gacattcaccacggcaatggcacccagcaagcattttacgatgacccctccgtgctctac
atctctttgcatcgctacgacaatgggaacttctttccaggctccggggctcctgaagag
gttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtggat
ccccccattggagatgtggaatacctgacagccttcaggacagtagtgatgcccattgcc
cacgagttctcacccgacgtcgttctagtctccgctgggtttgatgctgttgaaggacat
ctgtctccactgggtggctattctgtcaccgccagatgttttggccacttgaccaggcag
ctcatgacactggcagggggccgggtggtgctggccctggagggaggtcatgacttgacc
gccatctgtgatgcttctgaggcctgtgtctcggctctgctcagcgtggagctgcagccc
ttggatgaagcagtcttgcagcaaaagcccagcgtcaatgcagttgccacactagagaaa
gtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccactggtctgggc
tgctcgctgcgggaggctcagacgggtgagaaagaggaggccgagactgtgagcgccatg
gccctgctttccatgggggctgagcaggcccaggctgctgccactcaagagcacagcccc
cggccagccgaggagcccatggagcaggagcctgccctgtga

KEGG   Rattus norvegicus (rat): 84582
Entry
84582             CDS       T01003                                 

Symbol
Hdac7
Name
(RefSeq) histone deacetylase 7 isoform X1
  KO
K11408  histone deacetylase 7 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    84582 (Hdac7)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    84582 (Hdac7)
  09165 Substance dependence
   05034 Alcoholism
    84582 (Hdac7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    84582 (Hdac7)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     84582 (Hdac7)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     84582 (Hdac7)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 84582
NCBI-ProteinID: XP_006242426
RGD: 619982
Ensembl: ENSRNOG00000055597
Position
7
AA seq 953 aa
MDLRVGQRPTVEPPPEPALLTLQHPQRLHRHLFLAGLQQQQRSAEPMRLSMDPPLPELQG
AQQEQELRQLLNKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPSSPSIPYRTLEP
LDTEGAARSVLSSFLPPVPSLPTEPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRK
ESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPALGSEALLGQRLRLQETS
LAPFALPTVSLLPAITLGLPAPARADGDRRTHSTLGPRGPVLGNPHAPLFLHHGLEPEAG
GTLPSRLQPILLLDPSVSHAPLWTVPGLGPLPFHFAQPLLTTERLSGSGLHRPLNRTRSE
PLPPSATASPLLGPLQPRQDRLKPHVQLIKTAISPPQRPAKPSEKPRLRQIPSAEDLETD
GGGVGPMANDGLEHRESGRGPPEGRGAVSLQQHQQVPLWEQQHLAGRLSQGGPGDSVLLP
LAQIGHRPLSRTQSSPAAPVSLLSPEPTCQTQVLNSSEAPATGLVYDSVMLKHQCSCGDN
SKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLK
LDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELK
NGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTF
YQDPRVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAF
RIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLA
LEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQKPNLNAIRSLEAVVRVHRKYWGCM
QRLASCPDPWLPRVPGADAEVEAVTALASLSVGILAEDRPSKELMEEEEPMNL
NT seq 2862 nt   +upstreamnt  +downstreamnt
atggacctgcgagtgggccaaaggcccacagtggagccgccaccagagcctgcactgctg
accctgcagcaccctcagcgcctgcaccgccatctcttcctagcaggcttgcaacagcaa
cagcgctcagctgagcccatgaggctctccatggacccaccgctgccggagctgcagggg
gcacagcaggagcaagaacttcggcaacttctcaataaagacaagagcaagcgaagtgcc
gtagccagcagtgtggtcaagcagaaactggctgaagtgatcctgaagaaacagcaggca
gcccttgagagaacagtccaccccagcagccccagtatcccctacagaactcttgagccc
ttggacacagagggtgctgcccgctccgtgcttagcagcttcctgcctcctgttcccagc
ctgcccactgaacccccggaacattttcccctgcgtaaaacagtgtctgagccgaacctg
aagctgcgctacaaacccaagaaatccctggagaggcgtaagaatcccctgctcaggaag
gagagcgccccacccagtcttcggaggaggcctgctgagactcttggagattcctccccc
agtagtagcagcacacctgcgtcagggtgcagctcccccaatgacagcgagcatggccct
aaccctgccctgggctcagaggcgctcttgggccagcggctgcggctgcaggagacttct
ttggccccgttcgctttgccgacagtgtccttgctgcccgcaatcacactggggctgcct
gcccctgccagggctgatggtgaccgcaggacccattcaactttgggccctcggggtcct
gtcctagggaacccccatgctcccctcttcctgcaccatggtttggagccagaggctggg
ggcaccttaccctctcgcctgcagcccattctcctgctggatccctcagtctctcatgcc
ccactgtggactgtgcccgggctcgggcccttgcccttccactttgcccagcccttactg
accaccgagcggctctctgggtcaggcctccatcggccacttaaccggacccgctcagag
cccctgccccccagcgccactgcctcccctctgctgggccccctccagccccgccaggat
cggctcaaacctcatgtccagctgatcaagacagccatctcccctccccagaggcctgcc
aagcccagtgagaagccccgactgcggcagataccctcggctgaggacctagagacagat
ggtgggggagtgggacctatggcgaatgatggcctggaacatagggagtcaggccgtggg
ccgcctgagggcagaggggccgtttctctgcagcaacaccaacaggtgccactctgggag
cagcagcatcttgctgggcggctctcccagggaggccccggggactctgtgctgctacct
ctggcccagattggacaccggcccctgtccagaacccagtcttccccagccgcacctgtc
tccctgctgagcccagagcccacctgtcagacccaagtcctcaacagctcagaggcacct
gccacagggctggtctatgactcggtgatgctgaaacaccaatgttcctgtggagacaac
agcaagcatcccgagcacgcaggccgcatccagagcatctggtcccggctgcaggaacgg
ggtctccgcagccagtgtgagtgtctccgaggccgaaaggcttccctagaagagctgcag
tcagtccactctgaaaggcacgtgctcctctacggcacaaacccactcagccgcctcaaa
ctggataacgggaagcttacaggactcctggcccagcggacgtttgtgatgctaccctgt
ggcggggttggggtagatactgacaccatctggaatgagctgcattcctccaatgcagcc
cgctgggctgcaggcagcgtcaccgaccttgccttcaaagtcgcttcccgagagctaaag
aatggctttgctgtggtgcggcctccaggacaccatgcagatcattctacagccatgggc
ttttgcttcttcaactctgtggccatcgcctgccgacagctgcagcaacacggcaaagcc
agcaagatcctcattgtcgactgggatgttcaccatggcaacggcacacagcagactttc
tatcaggaccccagggtgctctacatatcccttcatcgccatgacgatggcaacttcttc
ccgggcagtggggccgtggatgaggtgggaaccggcagtggcgagggcttcaacgtcaat
gtggcttgggctgggggcttggatccacccatgggggatcctgagtacctggctgctttc
aggatagtggtgatgcccattgcccgcgagtttgctccagacctggtcctggtgtccgct
gggtttgacgctgcagagggtcatccagccccgctgggcggctaccatgtttctgccaaa
tgctttgggtacatgacacagcagctgatgagcttggcaggaggtgcggtggtgttggcc
ttggagggcggccatgacctcacagccatctgtgatgcctctgaggcctgtgtggcagct
cttctgggcaacaaggtggatcccctttcacaagaaagctggaaacagaaacccaacctc
aatgccatccgctctctggaagccgtggtcagggtgcacaggaaatactggggctgcatg
cagcgcttggcctcctgtccagacccctggctgcccagggtgccgggagctgatgcagaa
gtggaggccgtgactgcactggcatccctttccgttggcatcctggctgaagacaggccc
tcgaaggagctgatggaagaggaagaacccatgaacctctag

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