KEGG   Rattus norvegicus (rat): 134479415
Entry
134479415         CDS       T01003                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    134479415
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    134479415
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    134479415
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Cnd1 PRP38
Other DBs
NCBI-GeneID: 134479415
NCBI-ProteinID: XP_063118845
Position
6:105686739..105689984
AA seq 909 aa
MKSSVAHMKSSGHDRRESHNSYHQRSSSPEDRYTEQDRSPRDRDYSDYSRSDYERSRRGY
SYDDSMESRSRDREKRRERERDADHRKRTRKSPSPERRSPDRGVSQSSTQEEPTSKKKKK
KKKDEQDPLLTRTGGAYIPPAKLRMMQEQIMDKNSLAYQRMSWEALKKSINGLINKVNIC
NISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHLYAALVAIINSKFPQIGELILKR
LIINFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEILTLLLERPTDDSVEVAIGF
LKECGLKLTQVSPRGINAIFERLRNIVHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEG
LDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKVIKKEILDEGDSDSNTD
QEAGSSEVEEEEEDEEEGEEEEGGQKVTIHDKTEINLVLFRHTIYLAIQSSLDFEECVHK
LLKMEFAESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYNT
IHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMG
LPKLNARLKDETLQPFFEGLLPRNNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIV
AQKADAEQKKPVLTSSSSESSSGSDSSDSDSDSSESSSESSSEASNSSSSSSQSSASAKG
TRKKRQGKARGEEVDKLARSHQARDRQREGGREDQRHQEGRTERARSERHRAQNSRDADW
RDPPAKHMEDRSHENSYSRVGNGREQGSHREPEDRHGEPKKKWRERRDSFSENEKQRTRN
QDSDNVRRKDRSKSRERSRKHSGHKGDDDDRYQNGAERCWEKPSRYAEHSRESKRSQDRK
REKSPTKHK
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaaaagtagtgtggcacacatgaaatcctctggtcacgacagaagggagagccacaat
tcataccaccagaggagctcctccccagaagacagatatacagaacaagaccggtcaccc
cgggatagagactattctgattacagccggtcagactatgagcgatccagaagaggatac
tcttacgatgacagcatggaatcacgaagcagggaccgagagaaacgcagagagagagaa
agagacgcagaccatcggaaacggacccggaaatccccgtctccggaaaggaggagccca
gaccggggagtgagccagagttctactcaggaagaacccacatcgaagaagaagaagaag
aagaagaaggatgagcaggacccgctgctcacccgcaccgggggagcgtatattcctcct
gcaaagctcaggatgatgcaggagcagattatggataaaaacagcttagcataccagagg
atgagctgggaggctctgaagaaatccatcaatggtctcatcaacaaggtcaacatctgt
aatataagcatcattatccaagagctccttcaagagaacatcgtcagagggagaggactg
ctgtccagatctgttctgcaagcacagagcgcttctcccatcttcactcacctttatgca
gctttggtggcgataatcaactcaaagttcccacagattggagaactgatcctcaagaga
ctaattattaattttcgtaaaggataccgaaggaacgataagcaactttgcctgactgct
tcaaaatttgtggcacatcttattaatcaaaatgtggcacatgaggttctgtgcctggag
atcctcactttgctgctagagagaccaacagatgacagtgttgaagtagctatcggcttc
ctcaaggagtgtggtctcaaattaacccaggtgtcaccaaggggaatcaatgcaatcttt
gaacgcctgcgaaacattgtgcatgagtccgagattgacaaaagagtccagtacatgatt
gaagtgatgtttgctgtacggaaggatggattcaaggaccaccctgttattctggaagga
cttgacttagtggaagaggatgatcagtttacacacatgctccccttggaggatgactac
aatccagaagatgttcttaatgttttcaagatggatcctaattttatggagaatgaagag
aagtacaaggttattaaaaaagaaatcctcgatgaaggagacagtgactcaaacacagac
caggaagcaggaagtagtgaagttgaggaggaggaggaagacgaggaggaaggagaagag
gaggaaggaggacaaaaagtaactattcatgataaaacagaaatcaacctagtcttgttt
cgccatacaatatatcttgctattcagtcaagtttagattttgaagaatgtgtacacaag
ttgctgaaaatggagtttgctgagagccaaacaaaagaactctgcaacatgatacttgat
tgctgtgcccaacaaagaacctatgaaaaattttttggcctgttagctgggcggttttgt
atgctgaaaaaagagtacatggaatcatttgaaagtatattcaaggaacagtacaacacc
atccaccgcctagagacaaacaaattgagaaatgttgctaagatgttcgctcacctttta
tacacagactcacttccgtggagtgttctcgagtgtataaagctgagtgaagagacgaca
acatcatccagtaggatttttgtcaagatcttcttccaggagctgtgtgaatacatgggt
cttcctaaactgaatgcgaggttaaaggatgaaactcttcaaccattctttgaaggactg
ttaccccgaaacaacccacgcaacacccggtttgccatcaacttcttcacttccataggt
ctcggaggattgacggatgaacttcgagaacatctgaaaaatacgcccaaggtcatcgta
gcccagaaagcagacgctgagcagaagaaaccggtcctgacatcttcatcttcagagtct
tcctcggggtctgattcctctgactcagattctgacagcagcgagagcagctcagagtcc
tccagtgaagcgagcaactcctcctcctccagcagtcagagctctgcctcagctaaaggt
acaagaaagaaaagacaaggaaaggccagaggtgaagaagtagataagttagccaggagc
caccaggcacgtgacaggcagcgagaaggaggcagagaggaccaaaggcatcaggaaggg
aggactgagagagcaaggtctgaaagacacagagctcagaactcacgagatgcagactgg
cgagatcccccagcaaagcacatggaggacagaagtcatgagaatagttacagcagagtt
ggcaatggccgagaacaaggctcgcacagagagccagaagacaggcatggcgagccaaag
aagaagtggcgagagagaagagattctttttctgaaaatgagaagcaaagaacccgaaat
caggacagtgataatgttagaagaaaagatcgctccaagtcaagagagaggagtaggaag
cattctggtcataaaggagatgatgacgacaggtatcagaacggtgctgagagatgctgg
gaaaaacctagcagatacgctgaacattctagagaatcaaagagaagtcaggaccggaag
agagaaaagtctccaacaaaacacaaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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