KEGG   Roseateles amylovorans: N4261_11380
Entry
N4261_11380       CDS       T08701                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
roi  Roseateles amylovorans
Pathway
roi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:roi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N4261_11380 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:roi03019]
    N4261_11380 (pcnB)
Enzymes [BR:roi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     N4261_11380 (pcnB)
Messenger RNA biogenesis [BR:roi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     N4261_11380 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd DUF2204
Other DBs
NCBI-ProteinID: UXH80431
Position
2685181..2686863
AA seq 560 aa
MIKKLINKLLRKAEGGVILTPLGKRMEVLAEEHRIDPELLDERGVKVVKGLTDAGFEAYI
VGGAVRDLLLGRRPKDFDVATDATPEQVKNQFRRAFIIGRRFRIVHVVFGRGREHEVIEV
STFRALLTQDDAEQVQGNEKTSKDALAGKSHVVDASGRVLRDNVWGPQIEDAARRDFTVN
AMYYDPQRELVVDYHGGLADVRKKVLRMIGDPETRYREDPVRILRAVRFAAKLGFTIEPK
TRAPIPAMSALLANVPLSRMFDEMIKMLQTGHALASLDELRKQGLARGIFPILDAVLDKD
GALPENVHGKFVRLALEDTDKRVTEGRSVAPSFMLACMLWGEVQQRWKRLTDKGEGAVAA
LQQAIDLVFDARVGDISGRGKLAADMREIWMMQPRFERRTGSGPHRLIEQPRYRAGFDFL
ALRAEAGEIDPALADWWEDFALGDEDERRALLEQVRETQRQGTPRSRPKAGGGRVHQVAR
GAVGTSVSGESAAAVPLGDVDLDLSDADDEGEGDDGDGAGSEGAKAASPARKRRRRRKPK
AAGGAEGAAATSSSGSDGDA
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgattaaaaaactgatcaacaagctgttgcgcaaggcggagggcggcgtgatcctcacg
ccgctgggcaagcggatggaagtcctcgccgaggaacaccgcattgacccggagctgctc
gatgagcgcggcgtcaaggtggtcaagggcctgactgatgccggcttcgaggcctacatt
gtcggcggcgccgtgcgcgacctgctgctgggccgtcgccccaaggatttcgacgtggcc
accgatgccacgccggagcaggtgaagaaccagttccgccgcgctttcatcatcggccgc
cgtttccggatcgttcacgtggtgttcggccggggacgcgagcatgaagtgatcgaggtg
tccactttccgtgcactgctcacgcaagatgatgccgagcaggtacagggcaacgagaag
acgtccaaggacgcattggccggcaagtcgcatgtggtggatgccagcggccgcgtgctg
cgcgacaacgtctggggcccgcagatcgaagatgcggcccgccgcgacttcaccgtcaac
gccatgtattacgacccgcagcgcgagctggtggtcgactaccacggcggcttggctgac
gtccgcaaaaaggtgcttcggatgatcggcgacccggaaacccgctaccgcgaggatccg
gtccgcatcctgcgtgcggtgcgttttgccgccaagcttggcttcaccatcgaacccaag
acccgcgcgccgatcccggcgatgtcggctttgctggcgaatgtgccgctctcgcgcatg
ttcgacgagatgatcaagatgctgcagaccggccatgcgctggccagcctggacgaactg
cgcaagcagggtctggcccgcggcatcttcccgatcctggatgcggtgctggacaaggac
ggcgcactgccggagaacgtgcacggcaagttcgtccgcctggcgctggaagacaccgac
aagcgggtgaccgaaggccgttcggtcgcgccgagcttcatgctggcctgcatgctgtgg
ggtgaggtccagcagcgctggaagcgtctgaccgacaagggcgaaggcgccgtggcggcc
ttgcagcaggcgatcgacctggtgttcgatgcccgggtcggcgacatctccggccgcggc
aagctggcggcggacatgcgcgagatctggatgatgcagccgcgcttcgagcgccgcacc
ggcagcggtcctcatcgcctgatcgaacagccgcgctaccgcgccggcttcgacttcctc
gcgctgcgcgccgaggcgggcgaaatcgatcccgcgctggccgactggtgggaagacttc
gcgctgggcgatgaagacgagcgtcgcgcgctgctggagcaagtccgtgagacccagcgc
cagggcacgccgcgcagccgtccgaaggcgggcggcggtcgggtgcatcaggtggcacgc
ggcgcggtcggcacttctgtcagcggtgaatcagcggctgcggtgccgctgggcgacgtg
gacctggatctgagcgacgccgatgacgagggcgagggcgacgacggtgacggcgccggc
agcgaaggcgccaaagccgccagcccggcccgcaagcgccggcgtcggcgcaagcccaag
gcggcgggtggggcggaaggcgccgccgcaacatcctcctcgggttccgacggcgacgca
tga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (5)   

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