KEGG   Roseovarius phycicola: RZ517_01365
Entry
RZ517_01365       CDS       T10600                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rphc  Roseovarius phycicola
Brite
KEGG Orthology (KO) [BR:rphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rphc03032]
    RZ517_01365 (gyrB)
   03400 DNA repair and recombination proteins [BR:rphc03400]
    RZ517_01365 (gyrB)
Enzymes [BR:rphc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RZ517_01365 (gyrB)
DNA replication proteins [BR:rphc03032]
 Prokaryotic type
  DNA Topoisomerases
   RZ517_01365 (gyrB)
DNA repair and recombination proteins [BR:rphc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RZ517_01365 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_insert GyrB_hook Toprim_4 HATPase_c_3
Other DBs
NCBI-ProteinID: WWR46861
UniProt: A0ABZ2HLM8
Position
276404..278821
AA seq 805 aa
MAEAAASPEDYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADHVSVCIHRDNSVSVGDNGRGIPVELHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRGDKEHIARFEGGETVDHLKVVGDANGRRGTEVRFLAST
DTFSNLDYVFETLEKRLRELAFLNSGVRIILRDERSAEPLETELHYDGGVKEFVRYLDRS
KTALMPEPIFVTGERDEIGVEVAMWWNDSYHENVLPFTNNIPQRDGGTHLAGFRGALTRV
IQKYAADSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
VNEKLSEWFEENPNEAKMIVGKIVEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSE
KDPAKTELFIVEGDSAGGSAQTGRDRGTQAILPLKGKILNVERARFDRMLSSQEIGNLVM
ALGTGIGRDEFDLSKLRYHKIVLMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQP
PLFKVSRGKSEVYLKDQPALEDYLIEQGTDDTILRLGGGEDITGQDLVRVVEEARQANRI
LDAFPTHYPRHILEQAVIAGAFESGRVDANLQGVADAVADRLNLIALEWERGWQGRPTQD
HGVRLARMLRGVEEVRTLDGPILRGGEARRIGQLTKPLQEVYARPATLHRKERTQSIFGP
LDLLDAILKEGEKGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVKIDDMAEADDLFTK
LMGDVVEPRREFIQQNALNVENLDF
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggcagaagcagcagcgtcacccgaagactacggcgcagattccattaaagttctcaaa
ggcttagaggcggttcgcaagcgccccggtatgtatatcggcgacaccgacgacggctcc
ggcctccaccacatggtctacgaggtcgtcgacaacggaattgatgaggctttggccggt
catgcggaccatgtttcggtgtgtattcatcgtgataactcggtttctgtaggcgacaac
ggccgcggaattccggtggaactgcacgaggaggagggcgtgtccgccgccgaagtcatc
atgacccagctgcatgccggcggtaagtttgacagtaattcctacaaggtgtccggcgga
ctgcatggggtcggtgtgtcagtggtcaacgcgctctcagactggcttgagctgcgcatt
tggcgaggggacaaagagcatattgcccggtttgagggtggtgaaacggtggatcacctg
aaggtcgtaggggacgccaatggacggcgtggaaccgaagtgcggtttctggcctctacg
gatacgttctctaacctggattacgtttttgaaacccttgaaaaacgcctgcgagagctg
gcctttctcaattccggtgtgcggatcattttgcgcgacgaacgctccgctgagccgctg
gaaacagagctgcattacgacggcggcgtgaaggaattcgtccgctacctcgaccgcagc
aaaaccgctttgatgccagaaccgatatttgtcaccggagagcgcgatgagatcggggtt
gaagtggcgatgtggtggaatgacagctaccacgaaaatgttttgccgttcacaaacaat
atcccccagcgcgatggcggcacgcatttggcgggctttcgtggtgcgctgacgcgtgtc
attcaaaaatatgccgcggacagcggtatcgcgaagaaggaaaaggtcagcttcaccggc
gatgatgcgcgtgaaggcctcacttgtgtgttgtcggtcaaagtgcctgatccgaaattc
tccagccagaccaaggataagcttgtctcatccgaagtgcgtccggcggtggaaggtctt
gttaacgaaaagttgtctgaatggttcgaggaaaaccccaacgaggccaagatgatcgtc
ggcaagattgttgaggccgctttggcgcgagaagcggcgcgcaaggcacgggaattgacg
cggcgcaagacggcgatggatgtgaattacctggcgggcaagttgaaagattgctctgag
aaggaccctgccaagacagaattgtttattgttgagggcgacagcgccgggggctcagca
cagaccggccgcgatcgcggcacgcaggccattttgccactgaagggtaaaatcctcaac
gtagagcgggcccggtttgatcgcatgctctcgagccaggagattggaaacctcgtgatg
gcgctgggcacgggcatcgggcgagacgaatttgacttaagcaaactgcggtatcacaag
atcgttctgatgaccgacgcggatgtggatggggcgcatattcggacgctcttgctcacg
ttcttttatcggcaaatgccggagctgattgaagggggctatctttatatcgcgcagccg
ccgctctttaaggtaagtcggggtaaatccgaagtgtatctcaaagaccagccagcgctt
gaagactacctgattgagcaaggcacggatgacaccattctgcgtttgggtggcggtgaa
gatatcacaggccaggaccttgtgcgcgtagttgaagaggcgcgtcaggcaaaccgcatt
ctggatgcgttcccgacgcattatccgcgccatatcctggaacaagccgtaatcgccggt
gcgtttgaatcgggccgcgtggatgccaaccttcaaggcgtggcagatgccgttgcggac
cgtttgaacctgatcgcgctggaatgggaacgtggctggcagggaaggccaacgcaggac
catggtgtgcgtctggcgcgcatgctgcgcggtgtagaagaggtgcggaccttggatggc
cctatccttcggggcggcgaggcgcggcggattgggcagttgaccaagccattgcaagag
gtctatgcgcgtccggcaacgctgcaccgcaaggagcgcacgcagagcatattcggccca
ctggacctgctggatgcgattctcaaagagggtgaaaagggattgtctctgcagcgctac
aaaggcctgggcgagatgaacccggaccagctttgggaaaccacgctcgatccagatgcg
cgcacgctcttgcaggtcaagatcgacgatatggccgaggcggatgatctctttaccaaa
cttatgggcgatgtggtcgaaccgcgccgtgagttcatccagcaaaatgcgctcaatgtc
gagaacctcgatttctag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (10)   

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