KEGG   Rhodococcus pyridinivorans SB3094: Y013_05845
Entry
Y013_05845        CDS       T02974                                 
Name
(GenBank) geranylgeranyl pyrophosphate synthase
  KO
K13787  geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00900  Terpenoid backbone biosynthesis
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
Module
rpy_M00364  C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    Y013_05845
  09110 Biosynthesis of other secondary metabolites
   00997 Biosynthesis of various other secondary metabolites
    Y013_05845
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rpy01006]
    Y013_05845
Enzymes [BR:rpy01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     Y013_05845
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     Y013_05845
    2.5.1.29  geranylgeranyl diphosphate synthase
     Y013_05845
Prenyltransferases [BR:rpy01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   Y013_05845
SSDB
Motif
Pfam: polyprenyl_synt T3SS_SCTL
Other DBs
NCBI-ProteinID: AHD20222
Position
1227915..1228961
AA seq 348 aa
MEDSLRQFFTSRSDLVDSVGNGYRQAVDTLEAFVLRGGKRVRPRFAWTGWLGAGGDPTGP
DAEAVLQACSALELVQAAALVHDDIIDDSTTRRGFPTVHVEFTEQHRKAGWHGRPEQFGE
SVAILLGDLALVWADDMLHSAGLDPATVARVVPPWTAMRTEVLGGQYLDIANEVAADESV
EAATRVNRFKTAAYTIERPLHIGAALAGADDDLIAAYRRFGTDIGLAFQLRDDLLGVFGD
PEVTGKPSGDDLRSGKRTVLYALALETADASDPAAAELLRTSIGTDLSDAQVEHLRSLLV
DLGAVARIEDRISELTDSAFEALEASGATEEGKALLRESAVAATRRVA
NT seq 1047 nt   +upstreamnt  +downstreamnt
gtggaggactccctccggcagttcttcacctcacgctccgacctggtcgactcggtgggc
aatggataccggcaggccgtcgacacgctcgaggcattcgtgctgcgcggcggcaagcgg
gtgcgtccgcgtttcgcctggacgggctggctcggcgccggtggtgacccgaccgggccg
gacgccgaggccgtcctgcaggcgtgctccgcgctcgagctcgtgcaggccgcggcgctc
gtccacgacgacatcatcgatgactccaccacgcgccgcggattccccaccgtgcacgtc
gagttcaccgagcagcaccggaaggccggctggcacggcaggccggagcagttcggcgag
tcggtcgcgatcctgctcggcgacctcgccctggtctgggccgacgacatgctgcactcg
gcggggctcgaccccgcgaccgtcgcgcgcgtggtcccgccctggaccgcgatgcgcacc
gaagtgctcggcgggcagtacctcgacatcgccaacgaagtggcggcggacgaatcggtg
gaggccgctacgcgggtcaaccggttcaagaccgcggcgtacacgatcgaacgccccctg
cacatcggcgctgccctcgccggcgccgacgacgacctcatcgccgcataccgccgcttc
ggcaccgacatcggcctggcgttccagctgcgcgacgacctgctcggtgtcttcggcgac
cccgaggtcaccggcaagccttcgggcgacgacctgcgctcgggcaagaggaccgtcctg
tacgcgctggcactggagacggccgatgcctccgatccggccgcggccgagctgctgcgc
acctcgatcgggaccgatctgtccgacgcgcaggtcgagcacctccgctcgctgctcgtc
gatctcggcgcggtcgcccgaatcgaggaccgcatctcggaactgaccgacagcgcgttc
gaggcgctcgaggcgtccggcgccaccgaggagggcaaggcccttctgcgcgagtcggcg
gtcgcggcgacgcgacgggtggcgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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