GenomeNet

Database: RefSeq
Entry: NP_388565
LinkDB: NP_388565
Original site: NP_388565 
LOCUS       NP_388565                376 aa            linear   CON 12-FEB-2021
DEFINITION  response regulator aspartate phosphatase [Bacillus subtilis subsp.
            subtilis str. 168].
ACCESSION   NP_388565
VERSION     NP_388565.2
DBLINK      BioProject: PRJNA76
            BioSample: SAMEA3138188
DBSOURCE    REFSEQ: accession NC_000964.3
KEYWORDS    RefSeq.
SOURCE      Bacillus subtilis subsp. subtilis str. 168
  ORGANISM  Bacillus subtilis subsp. subtilis str. 168
            Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
REFERENCE   1
  AUTHORS   Borriss,R., Danchin,A., Harwood,C.R., Medigue,C., Rocha,E.P.C.,
            Sekowska,A. and Vallenet,D.
  TITLE     Bacillus subtilis, the model Gram-positive bacterium: 20 years of
            annotation refinement
  JOURNAL   Microb Biotechnol 11 (1), 3-17 (2018)
   PUBMED   29280348
REFERENCE   2  (residues 1 to 376)
  AUTHORS   Belda,E., Sekowska,A., Le Fevre,F., Morgat,A., Mornico,D.,
            Ouzounis,C., Vallenet,D., Medigue,C. and Danchin,A.
  TITLE     An updated metabolic view of the Bacillus subtilis 168 genome
  JOURNAL   Microbiology (Reading, Engl.) 159 (Pt 4), 757-770 (2013)
   PUBMED   23429746
REFERENCE   3  (residues 1 to 376)
  AUTHORS   Barbe,V., Cruveiller,S., Kunst,F., Lenoble,P., Meurice,G.,
            Sekowska,A., Vallenet,D., Wang,T., Moszer,I., Medigue,C. and
            Danchin,A.
  TITLE     From a consortium sequence to a unified sequence: the Bacillus
            subtilis 168 reference genome a decade later
  JOURNAL   Microbiology (Reading, Engl.) 155 (Pt 6), 1758-1775 (2009)
   PUBMED   19383706
REFERENCE   4  (residues 1 to 376)
  AUTHORS   Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G.,
            Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S.,
            Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C.,
            Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V.,
            Carter,N.M., Choi,S.K., Cordani,J.J., Connerton,I.F.,
            Cummings,N.J., Daniel,R.A., Denziot,F., Devine,K.M., Dusterhoft,A.,
            Ehrlich,S.D., Emmerson,P.T., Entian,K.D., Errington,J., Fabret,C.,
            Ferrari,E., Foulger,D., Fritz,C., Fujita,M., Fujita,Y., Fuma,S.,
            Galizzi,A., Galleron,N., Ghim,S.Y., Glaser,P., Goffeau,A.,
            Golightly,E.J., Grandi,G., Guiseppi,G., Guy,B.J., Haga,K.,
            Haiech,J., Harwood,C.R., Henaut,A., Hilbert,H., Holsappel,S.,
            Hosono,S., Hullo,M.F., Itaya,M., Jones,L., Joris,B., Karamata,D.,
            Kasahara,Y., Klaerr-Blanchard,M., Klein,C., Kobayashi,Y.,
            Koetter,P., Koningstein,G., Krogh,S., Kumano,M., Kurita,K.,
            Lapidus,A., Lardinois,S., Lauber,J., Lazarevic,V., Lee,S.M.,
            Levine,A., Liu,H., Masuda,S., Mauel,C., Medigue,C., Medina,N.,
            Mellado,R.P., Mizuno,M., Moestl,D., Nakai,S., Noback,M., Noone,D.,
            O'Reilly,M., Ogawa,K., Ogiwara,A., Oudega,B., Park,S.H., Parro,V.,
            Pohl,T.M., Portelle,D., Porwollik,S., Prescott,A.M., Presecan,E.,
            Pujic,P., Purnelle,B., Rapoport,G., Rey,M., Reynolds,S., Rieger,M.,
            Rivolta,C., Rocha,E., Roche,B., Rose,M., Sadaie,Y., Sato,T.,
            Scanlan,E., Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J.,
            Sekowska,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B.,
            Sorokin,A., Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K.,
            Takeuchi,M., Tamakoshi,A., Tanaka,T., Terpstra,P., Togoni,A.,
            Tosato,V., Uchiyama,S., Vandebol,M., Vannier,F., Vassarotti,A.,
            Viari,A., Wambutt,R., Wedler,H., Weitzenegger,T., Winters,P.,
            Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K., Yoshida,K.,
            Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and Danchin,A.
  TITLE     The complete genome sequence of the gram-positive bacterium
            Bacillus subtilis
  JOURNAL   Nature 390 (6657), 249-256 (1997)
   PUBMED   9384377
REFERENCE   5  (residues 1 to 376)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-SEP-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   6  (residues 1 to 376)
  AUTHORS   Genoscope -,C.E.A.
  CONSRTM   AMAbiotics and Genoscope
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2013) A. Danchin, AMAbiotics, Bldg G1, 2, rue
            Gaston Cremieux, 91000 EVRY antoine.danchin@normalesup.org Bldg G1
            Genoscope / CEA (Commissariat a l'energie atomique et aux energies
            alternatives): BP 191 91006 EVRY cedex - FRANCE (E-mail:
            seqref@genoscope.cns.fr - Web: www.genoscope.cns.fr)
REFERENCE   7  (residues 1 to 376)
  AUTHORS   Genoscope -,C.E.A.
  CONSRTM   Institut Pasteur and Genoscope
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2009) Genoscope - Centre National de Sequencage :
            BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
            - Web : www.genoscope.cns.fr)
REFERENCE   8  (residues 1 to 376)
  AUTHORS   Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-1997) I. Moszer, A. Danchin, Genetique des
            Genomes Bacteriens, Institut Pasteur, 28 rue du Docteur Roux, 75724
            Paris Cedex 15, FRANCE. E-mail: moszer@pasteur.fr,
            antoine.danchin@normalesup.org Phone: +33 (0)1 45 68 84 41, Fax:
            +33 (0)1 45 68 89 48
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CAB12503.
            On Aug 12, 2009 this sequence version replaced NP_388565.1.
            On or before Mar 17, 2009 this sequence version replaced
            gi:32468687, gi:32468690, gi:32468695, gi:32468704, gi:32468715,
            gi:32468723, gi:32468738, gi:32468743, gi:32468745, gi:32468758,
            gi:32468767, gi:32468778, gi:32468787, gi:32468796, gi:32468802,
            gi:32468809, gi:32468813, gi:32468825, gi:32468830, gi:32468833,
            gi:32468840, gi:38680335.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software), TMHMM
            and SignalP predictions, and synteny conservation (Syntonizer
            software) are available in the MicroScope annotation platform
            http://www.genoscope.cns.fr/agc/microscope.
            The large cluster comprising the i, h and g rDNA regions could not
            be properly resolved, we therefore incorporated the original
            sequence of rRNAihg in the final assembly.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Bacillus subtilis subsp. subtilis str. 168"
                     /strain="168"
                     /sub_species="subtilis"
                     /type_material="type strain of Bacillus subtilis"
                     /db_xref="taxon:224308"
     Protein         1..376
                     /product="response regulator aspartate phosphatase"
                     /EC_number="3.1.-.-"
                     /function="16.3: Control"
                     /calculated_mol_wt=43872
     Region          4..65
                     /region_name="RapH_N"
                     /note="response regulator aspartate phosphatase H, N
                     terminal; pfam18801"
                     /db_xref="CDD:408572"
     Region          99..127
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(100,103..104,107..108,110,140,143..144,147..148,
                     150..151,181,184..185,188..189,192)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          138..168
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          173..208
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <196..252
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          220..248
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          259..287
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..376
                     /gene="rapH"
                     /locus_tag="BSU_06830"
                     /old_locus_tag="BSU06830"
                     /coded_by="NC_000964.3:750959..752089"
                     /experiment="publication(s) with functional evidences,
                     PMID:16553878, 21908671"
                     /note="Evidence 1a: Function from experimental evidences
                     in the studied strain; PubMedId: 16553878, 21908671;
                     Product type e: enzyme"
                     /transl_table=11
                     /db_xref="EnsemblGenomes-Gn:BSU06830"
                     /db_xref="EnsemblGenomes-Tr:CAB12503"
                     /db_xref="GOA:Q59HN8"
                     /db_xref="InterPro:IPR011990"
                     /db_xref="InterPro:IPR013026"
                     /db_xref="InterPro:IPR019734"
                     /db_xref="PDB:3Q15"
                     /db_xref="SubtiList:BG11031"
                     /db_xref="UniProtKB/Swiss-Prot:Q59HN8"
                     /db_xref="GeneID:936065"
CONTIG      join(WP_003243267.1:1..376)
ORIGIN      
        1 msqaipssrv gvkinewykm irqfsvpdae ilkaeveqdi qqmeedqdll iyyslmcfrh
       61 qlmldylepg ktygnrptvt elletietpq kkltgllkyy slffrgmyef dqkeyveaig
      121 yyreaekelp fvsddiekae fhfkvaeayy hmkqthvsmy hilqaldiyq nhplysirti
      181 qslfviagny ddfkhydkal phleaalela mdiqndrfia isllniansy drsgddqmav
      241 ehfqkaakvs rekvpdllpk vlfglswtlc kagqtqkafq fieegldhit arshkfykel
      301 flflqavyke tvderkihdl lsyfekknlh ayieacarsa aavfesschf eqaaafyrkv
      361 lkaqedilkg eclyay
//
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