LOCUS       XP_004242892             321 aa            linear   PLN 24-OCT-2024
DEFINITION  26S proteasome regulatory subunit RPN13 isoform X1 [Solanum
            lycopersicum].
ACCESSION   XP_004242892
VERSION     XP_004242892.1
DBLINK      BioProject: PRJNA1160886
DBSOURCE    REFSEQ: accession XM_004242844.5
KEYWORDS    RefSeq.
SOURCE      Solanum lycopersicum (Lycopersicon esculentum)
  ORGANISM  Solanum lycopersicum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
            Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090806) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036512215.1-RS_2024_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/20/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Solanum lycopersicum"
                     /db_xref="taxon:4081"
                     /chromosome="7"
     Protein         1..321
                     /product="26S proteasome regulatory subunit RPN13 isoform
                     X1"
                     /calculated_mol_wt=35675
     Region          18..120
                     /region_name="PH_Rpn13"
                     /note="Pleckstrin homology-like domain of Regulatory
                     Particle Non-ATPase 13; cd13314"
                     /db_xref="CDD:270124"
     Site            order(46..47,49,66..73,90..92,95)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:270124"
     Region          187..286
                     /region_name="RPN13_C"
                     /note="UCH-binding domain; pfam16550"
                     /db_xref="CDD:465170"
     CDS             1..321
                     /gene="LOC101258384"
                     /coded_by="XM_004242844.5:220..1185"
                     /db_xref="GeneID:101258384"
ORIGIN      
        1 mgssstdafp qiqetlmefr agkmlmegkk vipdsrkglv rigrgeegll hfqwldrnln
       61 iveddqivfp eeavfekvnq ssgrvyilkf ctddrrlffw mqepaadnda qlcssvnfyl
      121 nqplefpged epeasaplpn sedmveedis sragnlvsas mnteassdvt ssgpvklsdl
      181 qrilsnigss deavdpdagl glgdilrpel ilplieeipl eeqlashlpe ghwtpyelme
      241 llqsppfrqq ldsftyvlrt gqidltqfgi dpsqykltvp sflealedsv skgsgsnesr
      301 qdekdlrsqt cnrsdpmdeg h
//