LOCUS       XP_005212667             536 aa            linear   MAM 26-DEC-2024
DEFINITION  suppressor of cytokine signaling 5 isoform X1 [Bos taurus].
ACCESSION   XP_005212667
VERSION     XP_005212667.1
DBLINK      BioProject: PRJNA450837
DBSOURCE    REFSEQ: accession XM_005212610.5
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_037338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_002263795.3-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/22/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Bos taurus"
                     /isolate="L1 Dominette 01449 registration number 42190680"
                     /db_xref="taxon:9913"
                     /chromosome="11"
                     /sex="female"
                     /tissue_type="left lung"
                     /breed="Hereford"
     Protein         1..536
                     /product="suppressor of cytokine signaling 5 isoform X1"
                     /calculated_mol_wt=61042
     Region          145..195
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..470
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198248"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198248"
     Region          479..534
                     /region_name="SOCS_SOCS5"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS5-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS5
                     inhibits Th2 differentiation by inhibiting...; cd03739"
                     /db_xref="CDD:239708"
     Site            order(480..485,491,498,504,509)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239708"
     CDS             1..536
                     /gene="SOCS5"
                     /coded_by="XM_005212610.5:309..1919"
                     /db_xref="GeneID:514773"
                     /db_xref="BGD:BT11243"
                     /db_xref="VGNC:VGNC:35123"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfg heggsrsenv dmnsnrclsv keknislgds apqqqssplr
       61 envalqlgls psknssrrnq ncaaeipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
      181 lqdtvglcfp mrtyskqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtev ngdscavpqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
      481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//