LOCUS       XP_011610514            1317 aa            linear   VRT 03-MAR-2026
DEFINITION  collagen type XVIII alpha 1 chain a isoform X6 [Takifugu rubripes].
ACCESSION   XP_011610514
VERSION     XP_011610514.2
DBLINK      BioProject: PRJNA543527
DBSOURCE    REFSEQ: accession XM_011612212.2
KEYWORDS    RefSeq.
SOURCE      Takifugu rubripes (Fugu rubripes)
  ORGANISM  Takifugu rubripes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea;
            Tetraodontidae; Takifugu.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_042285.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 5, 2019 this sequence version replaced XP_011610514.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_901000725.3-RS_2026_03
            Annotation Pipeline         :: NCBI Eukaryotic Genome Annotation
                                           Pipeline (EGAP)
            Annotation Software Version :: 10.5
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/02/2026
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Takifugu rubripes"
                     /db_xref="taxon:31033"
                     /chromosome="1"
     Protein         1..1317
                     /product="collagen type XVIII alpha 1 chain a isoform X6"
                     /calculated_mol_wt=134909
     Region          31..220
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          <282..>560
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <491..>737
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <633..>892
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          982..1030
                     /region_name="Collagen_trimer"
                     /note="Collagen trimerization domain; pfam20010"
                     /db_xref="CDD:466257"
     Region          1143..1311
                     /region_name="Endostatin"
                     /note="Collagenase NC10 and Endostatin; pfam06482"
                     /db_xref="CDD:461931"
     Site            order(1171,1180,1186,1195..1196,1199,1261..1262,1272)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238151"
     CDS             1..1317
                     /gene="col18a1a"
                     /coded_by="XM_011612212.2:190..4143"
                     /db_xref="GeneID:101077615"
ORIGIN      
        1 mkmrcarlqr llccvlvvig laasqwpedn gvsllqligd ppppeitqvd gpenspayvf
       61 gpdantgqla rahlpspfyr dfalifhlks ssnkggvvfs itdasqqimy vgvklsdvqg
      121 rnqniilfyt epgseesyea asfpvpstvd twtrfaiavr ddkvmfyfnc evdplvmpie
      181 rspdemelea gagvfigqag gadpgkflgv iselrvvgdp rvaeryceed gddsdmasge
      241 gsgyeesrpp kpeekhrwtt tpppsrpiqq pplstkeqvl retgalgakg ekgdrgerge
      301 kggrgpsgpk gdsgfgsssr ggargekgea gakgekgsag fgnqgtkgep gspgppgppg
      361 pvgdsvsckd gsagntclqg ppgadgepgv pgedgkpgpq gasgfpgtpg dqgpkgekgd
      421 tgegppgprg ppgppgppgt glrstfvdme gsgypdlesv rgppgppgip gppgppgtpg
      481 astaatglgs gaagppgkdg apgqpgspgl pgtdgspgat gpkgekgntg elglpgavgq
      541 kgdqgspglp gspgeaglag lpgprgpmgl pgppgpgyrv gfddmegsgg gfinrqpgvr
      601 gpegkqgppg fpglpgkpgf pglpgpkgnd gpegkdgrpg ldgfpgpqgp kgdrgdkgdr
      661 geagqdgtgl pgppgppglp geiiyrssgn tdgavgsvgp qgipgqpgfp gpagpkgdrg
      721 epgfpgfgek gekgepglai gpdgyrlsle gltglkgerg ipgpvgppgp ygppglkgei
      781 gmpgrsgrpg ingykgekge pgtgsgfayp gppgppgppg ppgptinqdr fnryddthrn
      841 ypavkgekge hgeqglpgip gtasnfdiya yknelkgerg dqglkgekge sggyydprfg
      901 gvqgppgtpg lpgpkgdsit gppgpqgppg qpgigydgpa gspgppgppg apgtstynyp
      961 vslpgppgpp gppgipghss gvtvlrsydt miatarrqpe gnliyiidka dlylrvrngl
     1021 rqvmlgnysp ffreleneva eaqpppvily phsqdqshnn gaghysqggp aiqpidpppq
     1081 ppvnnnnypp hyeprvpetr htghtegrsg tqtetqhpvt pqrppnppvl qplgnvetsa
     1141 salhlialna phtgnmrgir gadflcfqqa raiglkgtfr aflssklqdl ytivrrsdrd
     1201 nfpivnlkdq vlfrswesmf gdeaskiten vpiysfdgrd ilrdsawpek mvwhgssnkg
     1261 hrqtdqycet wragdravtg lasslksgyl lqqsasscsg syvvlciena ftshskk
//