LOCUS XP_011786933 974 aa linear PRI 30-MAR-2015
DEFINITION PREDICTED: macrophage colony-stimulating factor 1 receptor [Colobus
angolensis palliatus].
ACCESSION XP_011786933
VERSION XP_011786933.1
DBLINK BioProject: PRJNA279495
DBSOURCE REFSEQ: accession XM_011931543.1
KEYWORDS RefSeq.
SOURCE Colobus angolensis palliatus
ORGANISM Colobus angolensis palliatus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Cercopithecidae; Colobinae; Colobus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_012122932.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Colobus angolensis palliatus
Annotation Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..974
/organism="Colobus angolensis palliatus"
/isolate="OR3802"
/sub_species="palliatus"
/db_xref="taxon:336983"
/chromosome="Unknown"
/sex="female"
/tissue_type="heart"
Protein 1..974
/product="macrophage colony-stimulating factor 1 receptor"
/calculated_mol_wt=107775
Region 28..85
/region_name="IG_like"
/note="Immunoglobulin like; smart00410"
/db_xref="CDD:214653"
Region 203..295
/region_name="IgI_3_CSF-1R"
/note="Third immunoglobulin domain of the hematopoietic
colony-stimulating factor 1 receptor (CSF-1R), and similar
domains; member of the I-set of IgSF domains; cd20936"
/db_xref="CDD:409530"
Region 203..208
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409530"
Region 210..216
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409530"
Region 220..228
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409530"
Region 234..238
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409530"
Region 241..244
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409530"
Region 248..253
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409530"
Region 257..265
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409530"
Region 274..282
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409530"
Region 285..295
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409530"
Region 299..400
/region_name="IgI_4_SCFR_like"
/note="Fourth immunoglobulin (Ig)-like domain of stem cell
factor receptor (SCFR), and similar domains; member of the
I-set of IgSF domains; cd04975"
/db_xref="CDD:409364"
Region 299..305
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409364"
Region 309..314
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409364"
Region 317..327
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409364"
Region 331..338
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409364"
Region 340..343
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409364"
Region 347..352
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409364"
Region 361..370
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409364"
Site order(369..372,375)
/site_type="other"
/note="dimer interface [polypeptide binding]"
/db_xref="CDD:409364"
Region 377..385
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409364"
Region 388..399
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409364"
Region 401..489
/region_name="Ig_3"
/note="Immunoglobulin domain; pfam13927"
/db_xref="CDD:464046"
Region 543..914
/region_name="PTKc_CSF-1R"
/note="Catalytic domain of the Protein Tyrosine Kinase,
Colony-Stimulating Factor-1 Receptor; cd05106"
/db_xref="CDD:133237"
Site order(588..589,591..594,596,614,616,664,666,670,778,
782..783,785,796,814..818,827,862)
/site_type="active"
/db_xref="CDD:133237"
Site order(588..589,591..594,596,614,616,664,666,670,782..783,
785,796)
/site_type="other"
/note="ATP binding site [chemical binding]"
/db_xref="CDD:133237"
Site order(778,782,814..818,827,862)
/site_type="other"
/note="polypeptide substrate binding site [polypeptide
binding]"
/db_xref="CDD:133237"
Site 795..820
/site_type="other"
/note="activation loop (A-loop)"
/db_xref="CDD:133237"
CDS 1..974
/gene="CSF1R"
/coded_by="XM_011931543.1:353..3277"
/db_xref="GeneID:105504224"
ORIGIN
1 mgpgvlllll vvtawhgqgi pviepsgpel vvkpgatvtl rcvgngsvew dgpisphwtl
61 ysdgpssvlt tnnatfqntr tyrctepgdp lggsaaihly vkdparpwnv lanevvvfed
121 qdallpcllt dpvleagvsl vrlrgrpllr htnysfspwh gftihrakfi qgqdyqcsal
181 mggrkvmsis irlkvqkvip gppaltlvpa elvrirgeaa qivcsasnid vdfdvflqhn
241 ntklaipqrs dfhdnryqkv ltlslgqvdf qhagnyscva snvqgkhsts mffrvvesay
301 ldlsseqnli qevtvgegln lkvmveaypg lqgfnwtylg pfsdhqpepk lanattkdty
361 rhtftlslpr lkpseagrys flarnpggwr altfeltlry ppevsviwts ingsgtllca
421 asgypqpnvt wlqcaghtdr cdeaqvlqvw ddphpevlsq epfqkvtvqs lltaetlehn
481 qtyecrahns vgsgswafip isagarthpp deflftpvvv acmsvmalll lllllllyky
541 kqkpkyqvrw kiiesyegns ytfidptqlp ynekwefprn nlqfgktlga gafgkvveat
601 afglgkedav lkvavkmlks tahadekeal mselkimshl gqhenivnll gacthggpvl
661 viteyccygd llnflrrkae amlgpslspg qdpeggadyk nihlekkyvr rdsgfssqgv
721 dtyvemrpvs tssndsfseq dldkedgrpl elrdllhfss qvaqgmafla skncihrdva
781 arnvlltngh vakigdfgla rdimndsnyi vkgnarlpvk wmapesifdc vytvqsdvws
841 ygillweifs lglnpypgil vnskfyklvk dgyqmaqpaf apkniysimq acwalepthr
901 ptfqqicsll qeqaqedrre rdytnlpsss rsggsgsggs ssepeeesss ehlacceqgd
961 iaqpllqpnn yqfc
//
