LOCUS XP_012509329 536 aa linear PRI 01-JUN-2015
DEFINITION PREDICTED: suppressor of cytokine signaling 5 [Propithecus
coquereli].
ACCESSION XP_012509329
VERSION XP_012509329.1
DBLINK BioProject: PRJNA281642
DBSOURCE REFSEQ: accession XM_012653875.1
KEYWORDS RefSeq.
SOURCE Propithecus coquereli (Coquerel's sifaka)
ORGANISM Propithecus coquereli
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini;
Lemuriformes; Indriidae; Propithecus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_012150063.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Propithecus coquereli Annotation
Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..536
/organism="Propithecus coquereli"
/isolate="6110/MARCELLA"
/db_xref="taxon:379532"
/chromosome="Unknown"
/sex="female"
/tissue_type="kidney"
Protein 1..536
/product="suppressor of cytokine signaling 5"
/calculated_mol_wt=61143
Region 145..193
/region_name="SOCS"
/note="Suppressor of cytokine signalling; pfam12610"
/db_xref="CDD:432667"
Region 370..470
/region_name="SH2"
/note="Src homology 2 (SH2) domain; cl15255"
/db_xref="CDD:472789"
Site order(388,406,427,429)
/site_type="other"
/note="phosphotyrosine binding pocket [polypeptide
binding]"
/db_xref="CDD:198173"
Site order(428,458)
/site_type="other"
/note="hydrophobic binding pocket [polypeptide binding]"
/db_xref="CDD:198173"
Region 479..534
/region_name="SOCS_SOCS5"
/note="SOCS (suppressors of cytokine signaling) box of
SOCS5-like proteins. Together with CIS1, the CIS/SOCS
family of proteins is characterized by the presence of a
C-terminal SOCS box and a central SH2 domain. SOCS5
inhibits Th2 differentiation by inhibiting...; cd03739"
/db_xref="CDD:239708"
Site order(480..485,491,498,504,509)
/site_type="other"
/note="putative elongin B/C interaction [polypeptide
binding]"
/db_xref="CDD:239708"
CDS 1..536
/gene="SOCS5"
/coded_by="XM_012653875.1:277..1887"
/db_xref="GeneID:105818014"
ORIGIN
1 mdkvgkmwnn fkyrcqnlfs heggsrgesv dmnsnrclsv keknisivds apqqqssplr
61 envalqlgls psknssrrnq ncateipqiv eisiekdnes cvtpgtrlar rdsysrhapw
121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
301 pklapgmtei sgdssaipqt ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//