LOCUS       XP_012677125             985 aa            linear   VRT 27-JUL-2021
DEFINITION  LOW QUALITY PROTEIN: mast/stem cell growth factor receptor kita
            [Clupea harengus].
ACCESSION   XP_012677125
VERSION     XP_012677125.1
DBLINK      BioProject: PRJNA587748
DBSOURCE    REFSEQ: accession XM_012821671.3
KEYWORDS    RefSeq; corrected model.
SOURCE      Clupea harengus (Atlantic herring)
  ORGANISM  Clupea harengus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes;
            Clupeoidei; Clupeidae; Clupea.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_045161.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Clupea harengus Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Clupea harengus"
                     /db_xref="taxon:7950"
                     /chromosome="10"
     Protein         1..985
                     /product="LOW QUALITY PROTEIN: mast/stem cell growth
                     factor receptor kita"
                     /calculated_mol_wt=110070
     Region          120..193
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          214..304
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          225..229
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          241..245
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          265..274
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          284..289
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          297..300
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          308..407
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          328..332
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          342..346
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          371..375
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          385..390
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          398..401
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          546..922
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(588..591,594,596,614,616,647,663..666,786,790..791,
                     793,803..804)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..985
                     /gene="kita"
                     /coded_by="XM_012821671.3:178..3135"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:105895097"
ORIGIN      
        1 meyhlvvftv ilqltfhsgt ssltispngp qlvvrlnspl rlhcqgdgga vqwvrvdrpg
       61 rrlrgeerkg rsstilipra qithmgpyac qdeasgetrs iyvfvkdpan afrrsmmsal
      121 lvavghsvtf pclatdpdvs evrletcsgs plpsgmhyea slergvvles vqqgfqgcyr
      181 cagrlngeev ksgeyeldir lapdsvpvve lrsperlllt qgqsltlscs tsninsdinv
      241 rwtwppaarp sehpssrilt epvithvrgr tlhigsvvpa dsgsyrceak nekgtsaksv
      301 wldvygkgfi rvngtsnrtv rvrvgenlsl rteieayprp hritwrymgq elwntsdhii
      361 vtlsqghryr selklvrmkv yesgvysfea sngdasvnet ftvhviskpe ivshegpvdg
      421 qvrcvaegyp aplitwyycd qpharcsqll natqeeediv tvtlsnpafg irevesrlni
      481 sksnfptlec vatvegeqvy tlfsiseriv thdlftplli glvssaafls filvvlfyky
      541 mqkpkyqiqw kviegihgnn yvyidptqlp ydnqwefprd klrfgktlgs gafgrvveat
      601 ahgmskadsv mkvavkmlkp sahatekeal iselkvlsyl gnhinivnll gactvggptl
      661 viteyccfgd llnflrkkrd sffwskeeed thyrnvpmqt ngsrepnnsy vvmkpavtrp
      721 lapapthpsg krrslrrgts anesdllnep tqddalpldt edllsfsyqv akgmdflask
      781 ncihrdlaar nilltegrva kicdfglard ittdsnyvvk gnarlpvkwm spesifdcvy
      841 tfesdvwsyg illweifslg sspypgmpvd akfykmikeg yrmdapdfap semylvmcsc
      901 wdtdpyrrps frklvekvel qlsdatkhiy lnfnsrfpat nvarenqlpp navtqrqsst
      961 gghhsppsqp llhaqeaggt rprqv
//