GenomeNet

Database: RefSeq
Entry: XP_013886047
LinkDB: XP_013886047
Original site: XP_013886047 
LOCUS       XP_013886047             418 aa            linear   VRT 23-JUN-2025
DEFINITION  proteasomal ubiquitin receptor ADRM1 [Austrofundulus limnaeus].
ACCESSION   XP_013886047
VERSION     XP_013886047.1
DBLINK      BioProject: PRJNA294420
DBSOURCE    REFSEQ: accession XM_014030593.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Austrofundulus limnaeus
  ORGANISM  Austrofundulus limnaeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes;
            Rivulidae; Austrofundulus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_013953489.1) and transcript sequence (GDHP01027377.1) annotated
            using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_001266775.1-RS_2025_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/18/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            assembly gap :: added 123 transcript bases to patch genome assembly
                            gap
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Austrofundulus limnaeus"
                     /db_xref="taxon:52670"
                     /chromosome="Unknown"
     Protein         1..418
                     /product="proteasomal ubiquitin receptor ADRM1"
                     /calculated_mol_wt=42911
     Region          23..127
                     /region_name="PH_Rpn13"
                     /note="Pleckstrin homology-like domain of Regulatory
                     Particle Non-ATPase 13; cd13314"
                     /db_xref="CDD:270124"
     Site            order(52..53,55,72..79,97..99,102)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:270124"
     Region          292..397
                     /region_name="RPN13_C"
                     /note="UCH-binding domain; pfam16550"
                     /db_xref="CDD:465170"
     CDS             1..418
                     /gene="LOC106534082"
                     /coded_by="XM_014030593.1:156..1412"
                     /db_xref="GeneID:106534082"
ORIGIN      
        1 mssgalfpsl vsgsrgsssk ylvefragkm tlkgntvtpd krkgtvyiqq sddslihfcw
       61 kdrttgnvdd dliifpddce fkrvsqcttg rvyvlkfkag skrlffwmqe pktdkdeefc
      121 rkvneylnnp pipgaagsgg gsghelsalg gegglqnllg nmshnqlmql igptglgglg
      181 lgalagpgla nllgsggppt sssssssrsq aapaatpssg gtprlsssqt panpappats
      241 aptstsvtts apaaaaaaaq tpvtpasvgs ppphqpiqls dlqsilanmn vpaaaaaqgp
      301 gvdlasvctp emmapilsnp evqqrllefl psgeslpqsa deiqntlssp qfqqsmsmfs
      361 salasgqlgp lmsqfglsne avdaanrgdv eafaramqgs kgapkekege gdedmsln
//
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