LOCUS       XP_015246435            1102 aa            linear   VRT 14-JAN-2016
DEFINITION  PREDICTED: platelet-derived growth factor receptor beta [Cyprinodon
            variegatus].
ACCESSION   XP_015246435
VERSION     XP_015246435.1
DBLINK      BioProject: PRJNA308224
DBSOURCE    REFSEQ: accession XM_015390949.1
KEYWORDS    RefSeq.
SOURCE      Cyprinodon variegatus (sheepshead minnow)
  ORGANISM  Cyprinodon variegatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes;
            Cyprinodontidae; Cyprinodon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_015150972.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Cyprinodon variegatus Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Cyprinodon variegatus"
                     /isolate="N-32"
                     /db_xref="taxon:28743"
                     /chromosome="Unknown"
                     /sex="female"
                     /geo_loc_name="USA: Navarre, FL"
                     /collection_date="17-Sep-2010"
     Protein         1..1102
                     /product="platelet-derived growth factor receptor beta"
                     /calculated_mol_wt=124530
     Region          42..121
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          213..306
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          230..234
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409447"
     Region          243..247
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409447"
     Region          270..274
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409447"
     Region          284..289
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409447"
     Region          299..302
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409447"
     Region          310..407
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          330..334
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409445"
     Region          343..347
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409445"
     Region          371..375
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409445"
     Region          385..390
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409445"
     Region          398..401
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409445"
     Region          552..951
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(596..599,602,604,622,624,655,671..674,815,819..820,
                     822,832..833)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133238"
     CDS             1..1102
                     /gene="pdgfrb"
                     /coded_by="XM_015390949.1:422..3730"
                     /db_xref="GeneID:107095000"
ORIGIN      
        1 mrrlvasvlh lmvvytalvp fcckvhslei fpnaeefili qgsslnltcs gslsatwefk
       61 rddtpnildd ldehgnpryi lfqtdptsvs ltlnrvswrh tgvyqcidrl tdemaevtvf
      121 vpdpefwfvv rphgmvakts eesivpcvat npnitvslye mdthrfitgr yipgegyrah
      181 ledrtyvchg qlngklresq sfdvfsitvp ngvdpyints ktvlkqgepl tinctvhgvd
      241 lvsfywnvpd tvadkvdqet dysslkgmqs rltfpyttvd hsgnyecevv estqgftgss
      301 tvtitvleng fvelkparqq nisaklqdnv elrvditayp ppkirwtkdg ttikeekaiv
      361 frqeheiryv tiltlvrvra eqkglytaii fngddtkevv fdlevqvpar ikeltdhhlp
      421 glkdvvtcta egyptptiyw yscdsmlkcn etaelhplkp qpeelsiqtn vsyikarevs
      481 rvssqvifhk pqqvtvrcev fnqagddgrn iklvhstwfs rvavlaavla lvvifmlsii
      541 iliavwrkkp ryeirwkvie svsqdgheyi yvdpihlpyd lawemprenl vlgrtlgsga
      601 fgrvveatay glthshsstk vavkmlkssa rrsetqalms elkimshlgp hlnivnllga
      661 ctkhgplylv teycrygdlv dylhrnkhtf lhyyaeknqd sgciisrgst plsqrkgyvs
      721 fgsesdggym dmskdepsiy vpmqeqldti kyadiqpspy espyqqdlyq eqgggrldlv
      781 isdsptltyd dllgfsyqva kgmdflaskn cvhrdlaarn vlicegklvk icdfglardi
      841 mhdsnyiskg stflplkwma pesifhnlyt tlsdvwsygi llweiftlgg tpypdlpmne
      901 ifysalkrgy rmgkpahasd evyeimkkcw dekfekrpef sllvhnvgnm lmdsykkryn
      961 qvnenflksd hpavartkpr lsspfpvtnh afrspspvty plpgehnqsp rpgdgwread
     1021 gqeaipsyne yiiplpdlkp eevftevase spvsslvlee eadstsqdta etlpeedrve
     1081 dtserdallg sngtpeveds fl
//