LOCUS XP_015731315 1090 aa linear VRT 18-FEB-2020
DEFINITION platelet-derived growth factor receptor beta [Coturnix japonica].
ACCESSION XP_015731315
VERSION XP_015731315.1
DBLINK BioProject: PRJNA314147
DBSOURCE REFSEQ: accession XM_015875829.2
KEYWORDS RefSeq.
SOURCE Coturnix japonica (Japanese quail)
ORGANISM Coturnix japonica
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Perdicinae; Coturnix.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_029528.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Coturnix japonica Annotation Release
101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1090
/organism="Coturnix japonica"
/isolate="7356"
/db_xref="taxon:93934"
/chromosome="13"
/sex="male"
/tissue_type="blood"
/geo_loc_name="France: Tours, INRA PEAT"
Protein 1..1090
/product="platelet-derived growth factor receptor beta"
/calculated_mol_wt=122134
Region 35..97
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 207..305
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 226..230
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409353"
Region 239..243
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409353"
Region 269..273
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409353"
Region 283..288
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409353"
Region 298..301
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409353"
Region 309..410
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 329..333
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409353"
Region 342..346
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409353"
Region 374..378
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409353"
Region 388..393
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409353"
Region 401..404
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409353"
Region 558..959
/region_name="Protein Kinases, catalytic domain"
/note="The protein kinase superfamily is mainly composed
of the catalytic domains of serine/threonine-specific and
tyrosine-specific protein kinases. It also includes RIO
kinases, which are atypical serine protein kinases,
aminoglycoside phosphotransferases; cl21453"
/db_xref="CDD:473864"
Site order(602..605,608,610,628,630,661,677..680,822,826..827,
829,839..840)
/site_type="other"
/note="ATP binding site [chemical binding]"
/db_xref="CDD:270870"
CDS 1..1090
/gene="PDGFRB"
/coded_by="XM_015875829.2:427..3699"
/db_xref="GeneID:107320191"
ORIGIN
1 mlcpslkasl qlliltgllv vtsgdsglhi epedaelvls lhstfslmcy gdsalvwerd
61 gqplaavleh rdgvfvsnlt lrnvtgrhtg eyaclyspdq aperaerkal yiyvpdpslv
121 flpaitseef fifitgytea tipcrvtnpe lqvtlyekkv enpipavydp qqgfkgffed
181 ktyycqaivd dqevdsdtfy vyriqvssvn vsisavqtiv rqgenvtlmc tvsgnelvnf
241 nwdyprkqag kavepvtdfl pgsshdirsi lviqnaeled sgtyvcnvse gyhektdrkd
301 itvqviergf vhfhthlast vyaevhkshi iqvdveaypq pnivwlknnk tltmesssef
361 titnrnlset ryqtslvlvr vkqeeggyyt irasneddaq elsfhlqinv pakvvnlken
421 ssassgeqtv tcsaegmpqp eiswstcsni kwcgnqgqpt qllgnnsaei glhtnatyha
481 elqvfrvnst lqlhrvdepl llrctvqnsl gttfqditlv pnalpfkvvi isvilallvl
541 tvisliiliv lwqkkpryei rwkviesvss dgheyiyvdp mqlpydsswe vprdmlvlgr
601 tlgsgafgrv veatahglsh sqstmkvavk mlkstarsse kqalmselki mshlgphlni
661 vnllgactkg gpiyiiteyc rygdlvdylh rnkhtflqsc gekarreael ygntikedhv
721 qshlslsves dggymdmskd esldyvpmsd mkgevkyadi essnygtpye ldsyspsape
781 rtdrvtline spllsymdlv gfsfqvangm eflaskncvh rdlaarnvli cegklvkicd
841 fglardimrd snyiskgstf lplkwmapes ifnnlyttls dvwsfgillw eiftlggtpy
901 pelpmneqfy naikrgyrms kpthasdeiy eimqkcweek feirpsfsql vvlmgnllvd
961 cyrkryqqvd eefmksdhpa vvrtrptipg lnnarlppss ptlytavhqn ggendyiipl
1021 pdpkpeaicd lpqeasisra ssmlneants stiscdsplg prqdeepecd lqlgcqelap
1081 ghheveesfl
//