LOCUS       XP_023561221            1397 aa            linear   ROD 24-JAN-2018
DEFINITION  collagen alpha-1(XV) chain isoform X1 [Octodon degus].
ACCESSION   XP_023561221
VERSION     XP_023561221.1
DBLINK      BioProject: PRJNA193441
DBSOURCE    REFSEQ: accession XM_023705453.1
KEYWORDS    RefSeq.
SOURCE      Octodon degus (degu)
  ORGANISM  Octodon degus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Hystricomorpha; Octodontidae; Octodon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_004524797.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Octodon degus Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Octodon degus"
                     /isolate="3935"
                     /db_xref="taxon:10160"
                     /chromosome="Unknown"
                     /sex="female"
     Protein         1..1397
                     /product="collagen alpha-1(XV) chain isoform X1"
                     /calculated_mol_wt=143155
     Region          62..250
                     /region_name="TSPN"
                     /note="Thrombospondin N-terminal -like domains;
                     smart00210"
                     /db_xref="CDD:214560"
     Region          <658..>939
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <777..>1077
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1144..1190
                     /region_name="Collagen_trimer"
                     /note="Collagen trimerization domain; pfam20010"
                     /db_xref="CDD:466257"
     Region          1227..1391
                     /region_name="Endostatin"
                     /note="Collagenase NC10 and Endostatin; pfam06482"
                     /db_xref="CDD:461931"
     Site            order(1251,1260,1266,1275..1276,1279,1341..1342,1352)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238151"
     CDS             1..1397
                     /gene="Col15a1"
                     /coded_by="XM_023705453.1:270..4463"
                     /db_xref="GeneID:101585954"
ORIGIN      
        1 maprsswrlr lllstsalls tvtgtlastg lvlstvlrhi phigsamqeg kwpdqdsasq
       61 ghldltqlig vplpssvsfv tgyggfpays fgpganigrp artlipptff rdfaisvlak
      121 psstqggvlf aitdafqkvi ylglrlsdve dghqrvilyy tepgshvshe aavflvpvmt
      181 nrwmhfaviv qgeevtllmd ceehshvlfq rssgplafep stgifvgsag atgldrftgs
      241 iqqltihadp rmpeelceaq essasgeasg lqetdtetva eileaitytq appkeakpep
      301 inipptsssa ledmelsgep vmegtletnl sisqhsspeq gsgevlndtl ervpavdgda
      361 vadagsgera fpdtteeqsp aataagedlv ttstnqeaeg ssiptavptl amstlapqeg
      421 tipgledeeg saamgtgeae mpvntageve sgsmptegps ftvstwspre ettlgpdeal
      481 simataatav plgpfeeeaa sgaftddqai ltptvapvqa sgastddlav ltstvalgqv
      541 vtptpededl eplataggdg vssappaglp lpeptaaper rvtlaqlvhg emeeptgvkv
      601 aaeaegsgqg wsldigsgsg dlvdreellr gppgppgppg spglpgkpga dvlmgppgsp
      661 gedgaagepg lpgpegepgl dgaigrpgik gekgargpng svgekgdpgn rglpgppgkn
      721 gqagtpgvmg ppgppgppgp pgpgcatgle sedtegsghi pllrepgisr ptvssglkge
      781 kgdqgpkger gldgtstvgp pgprgppgri eilssslini thgslnfsdi pellgppgpd
      841 glpglpgfpg prgpkgdtgl pgfpglkgeq gekgepgail tgdvplerlk gtkgepglhg
      901 apgpmgpkgp pghkgefglp grpgrpglng lkgakgdrgi mmpgppglpg ppgppgppga
      961 vvnikgavfp vpvrphckmp vgttqpgdpe litfhgvkge kgswglpgsk gekgdqgaqg
     1021 ppgppvdpay lryflnslkg engdrgfkge kgdsndnffv sgspglpgnp gvagqkgeai
     1081 vgpqgppgip gqpgppgfgr pgapgppgpp gppgppailg aavalpgppg ppgqpglpgs
     1141 rnlvtafsnm ddmlqkahlv iegtfiylrd steffirvrd gwkklqlgel ipipadsppp
     1201 palssnsyql qpplnpilsg nyenpalhli alnmpfsgdi radfqcfqqa raagllstfr
     1261 aflsshlqdl stvvrkaery slpivnlkgq vlfnnwdsif sgdggqfntq vpiysfdgrd
     1321 vmtdpswpqk vvwhgstphg vrlvdkycea wrtadmavtg fasplstgki leqkpyscan
     1381 rlivlciens fmtdark
//