LOCUS XP_023817056 1047 aa linear VRT 15-FEB-2018
DEFINITION huntingtin-interacting protein 1 isoform X1 [Oryzias latipes].
ACCESSION XP_023817056
VERSION XP_023817056.1
DBLINK BioProject: PRJNA183868
DBSOURCE REFSEQ: accession XM_023961288.1
KEYWORDS RefSeq.
SOURCE Oryzias latipes (Japanese medaka)
ORGANISM Oryzias latipes
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes;
Adrianichthyidae; Oryziinae; Oryzias.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_019871.2) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Oryzias latipes Annotation Release
103
Annotation Version :: 103
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1047
/organism="Oryzias latipes"
/db_xref="taxon:8090"
/chromosome="13"
Protein 1..1047
/product="huntingtin-interacting protein 1 isoform X1"
/calculated_mol_wt=116872
Region 39..305
/region_name="ANTH"
/note="ANTH domain; pfam07651"
/db_xref="CDD:400137"
Region <375..>637
/region_name="SMC_prok_B"
/note="chromosome segregation protein SMC, common
bacterial type; TIGR02168"
/db_xref="CDD:274008"
Region 482..580
/region_name="HIP1_clath_bdg"
/note="Clathrin-binding domain of Huntingtin-interacting
protein 1; pfam16515"
/db_xref="CDD:465154"
Region <545..850
/region_name="MARTX_Nterm"
/note="MARTX multifunctional-autoprocessing
repeats-in-toxin holotoxin N-terminal region; NF012221"
/db_xref="CDD:467957"
Region 835..1033
/region_name="ILWEQ"
/note="I/LWEQ domain; smart00307"
/db_xref="CDD:214607"
CDS 1..1047
/gene="hip1"
/coded_by="XM_023961288.1:221..3364"
/db_xref="GeneID:101174446"
ORIGIN
1 mdrvkssmqq vpnaipkvir rtgganslet erenfervqa vsinkaintq evavkekhar
61 tcilgthhek gahtfwavvh rlplssnavl cwkfchvfhk llrdghpnvi kdsmrnkadl
121 tdmsrmwghl segygklcsi ylkllitkie fhiknprfpg nlqmsnrqld evgendvnnf
181 fqltvemfdy lecelnlfla vfssldmsrs vsvtaagqcr lapliqvild cshlydytvk
241 llfklhsclp adtlqghrdr fqeqfkklks lfyrssnlqy fkrliqipql penppnflra
301 salsehispv vvipaesssp esehvvetdd lvdtdipvlp apaetkfddl fgtsaaidpf
361 nftsqngmrk ddkdrlieql treiqalkee lesfrlesgr lcqalrgrvs eleaelaeqs
421 hlrmqavges eflkaelddv rrvreyteke qrslteiekk aqaneqrytk lkekytelvq
481 shadllrkna evtrqmtvar aaqdevevlk kemqekvkav qdvadrqere qqrqlediqk
541 elvctreeld tlkssvtssq qsrealssqm aalesekael vqsmskveae leaqrqelqr
601 aqsslatere sgvkaaealq nqlnekesre qalesqlvaa rwsslrgave eaekivqdsl
661 sqiddpahis ctssadylas rcqasldsld hlnssiktfm ddnsavlelv ravtrsghlv
721 getivqgsat shmvpveksd alletvktcg aevllmlgqm kqqdhlaaad stklrvalea
781 ilataeklrp rglelqqgel gdlveqemaa tsaavesaas rieemlnksr avdtgvkmev
841 nerilascte lmeaikalvl sskdlqrdiv esgrgaasmk efyaknsrwt eglisaskav
901 gwgatvlvda adlvvqgkgk feelmvcshe iaastaqlva askvkadkds tnlqrlqras
961 rgvtqatavv vastksgksq iedtetmdfs smtltqikrq emdaqvlvle letrlqkere
1021 rlgelrkkhy elagvaegwg gddegtg
//
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