GenomeNet

Database: RefSeq
Entry: XP_023817056
LinkDB: XP_023817056
Original site: XP_023817056 
LOCUS       XP_023817056            1047 aa            linear   VRT 15-FEB-2018
DEFINITION  huntingtin-interacting protein 1 isoform X1 [Oryzias latipes].
ACCESSION   XP_023817056
VERSION     XP_023817056.1
DBLINK      BioProject: PRJNA183868
DBSOURCE    REFSEQ: accession XM_023961288.1
KEYWORDS    RefSeq.
SOURCE      Oryzias latipes (Japanese medaka)
  ORGANISM  Oryzias latipes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes;
            Adrianichthyidae; Oryziinae; Oryzias.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_019871.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryzias latipes Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Oryzias latipes"
                     /db_xref="taxon:8090"
                     /chromosome="13"
     Protein         1..1047
                     /product="huntingtin-interacting protein 1 isoform X1"
                     /calculated_mol_wt=116872
     Region          39..305
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     Region          <375..>637
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          482..580
                     /region_name="HIP1_clath_bdg"
                     /note="Clathrin-binding domain of Huntingtin-interacting
                     protein 1; pfam16515"
                     /db_xref="CDD:465154"
     Region          <545..850
                     /region_name="MARTX_Nterm"
                     /note="MARTX multifunctional-autoprocessing
                     repeats-in-toxin holotoxin N-terminal region; NF012221"
                     /db_xref="CDD:467957"
     Region          835..1033
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..1047
                     /gene="hip1"
                     /coded_by="XM_023961288.1:221..3364"
                     /db_xref="GeneID:101174446"
ORIGIN      
        1 mdrvkssmqq vpnaipkvir rtgganslet erenfervqa vsinkaintq evavkekhar
       61 tcilgthhek gahtfwavvh rlplssnavl cwkfchvfhk llrdghpnvi kdsmrnkadl
      121 tdmsrmwghl segygklcsi ylkllitkie fhiknprfpg nlqmsnrqld evgendvnnf
      181 fqltvemfdy lecelnlfla vfssldmsrs vsvtaagqcr lapliqvild cshlydytvk
      241 llfklhsclp adtlqghrdr fqeqfkklks lfyrssnlqy fkrliqipql penppnflra
      301 salsehispv vvipaesssp esehvvetdd lvdtdipvlp apaetkfddl fgtsaaidpf
      361 nftsqngmrk ddkdrlieql treiqalkee lesfrlesgr lcqalrgrvs eleaelaeqs
      421 hlrmqavges eflkaelddv rrvreyteke qrslteiekk aqaneqrytk lkekytelvq
      481 shadllrkna evtrqmtvar aaqdevevlk kemqekvkav qdvadrqere qqrqlediqk
      541 elvctreeld tlkssvtssq qsrealssqm aalesekael vqsmskveae leaqrqelqr
      601 aqsslatere sgvkaaealq nqlnekesre qalesqlvaa rwsslrgave eaekivqdsl
      661 sqiddpahis ctssadylas rcqasldsld hlnssiktfm ddnsavlelv ravtrsghlv
      721 getivqgsat shmvpveksd alletvktcg aevllmlgqm kqqdhlaaad stklrvalea
      781 ilataeklrp rglelqqgel gdlveqemaa tsaavesaas rieemlnksr avdtgvkmev
      841 nerilascte lmeaikalvl sskdlqrdiv esgrgaasmk efyaknsrwt eglisaskav
      901 gwgatvlvda adlvvqgkgk feelmvcshe iaastaqlva askvkadkds tnlqrlqras
      961 rgvtqatavv vastksgksq iedtetmdfs smtltqikrq emdaqvlvle letrlqkere
     1021 rlgelrkkhy elagvaegwg gddegtg
//
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