LOCUS       XP_028352607             479 aa            linear   MAM 10-JAN-2025
DEFINITION  suppressor of cytokine signaling 5-like [Physeter macrocephalus].
ACCESSION   XP_028352607
VERSION     XP_028352607.2
DBLINK      BioProject: PRJNA434122
DBSOURCE    REFSEQ: accession XM_028496806.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Physeter macrocephalus (sperm whale)
  ORGANISM  Physeter macrocephalus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Physeteridae; Physeter.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_041225.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 14, 2023 this sequence version replaced XP_028352607.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_002837175.3-RS_2025_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/08/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Physeter macrocephalus"
                     /isolate="SW-GA"
                     /db_xref="taxon:9755"
                     /chromosome="12"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
     Protein         1..479
                     /product="suppressor of cytokine signaling 5-like"
                     /calculated_mol_wt=54388
     Region          145..193
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..462
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     CDS             1..479
                     /gene="LOC129391348"
                     /coded_by="XM_028496806.2:809..2248"
                     /db_xref="GeneID:129391348"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfs heggsrsenv dmnsnrclsv ndknisigds apqqqssplr
       61 envalqlgls psknssrrnq ncateipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr avgsrslrqr
      181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtei ngdssaipqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dprvfectct wstvliyyl
//