LOCUS       XP_029309453            1307 aa            linear   VRT 09-JUL-2025
DEFINITION  collagen, type XV, alpha 1b isoform X2 [Cottoperca gobio].
ACCESSION   XP_029309453
VERSION     XP_029309453.1
DBLINK      BioProject: PRJNA530544
DBSOURCE    REFSEQ: accession XM_029453593.1
KEYWORDS    RefSeq.
SOURCE      Cottoperca gobio
  ORGANISM  Cottoperca gobio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Notothenioidei;
            Bovichtidae; Cottoperca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_041371.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_900634415.1-RS_2025_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/09/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Cottoperca gobio"
                     /db_xref="taxon:56716"
                     /chromosome="17"
     Protein         1..1307
                     /product="collagen, type XV, alpha 1b isoform X2"
                     /calculated_mol_wt=133955
     Region          74..263
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          <363..>701
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <524..>834
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <735..>980
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1028..1076
                     /region_name="Collagen_trimer"
                     /note="Collagen trimerization domain; pfam20010"
                     /db_xref="CDD:466257"
     Region          1130..1298
                     /region_name="Endostatin"
                     /note="Collagenase NC10 and Endostatin; pfam06482"
                     /db_xref="CDD:461931"
     Site            order(1158,1167,1173,1182..1183,1186,1248..1249,1259)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238151"
     CDS             1..1307
                     /gene="col15a1b"
                     /coded_by="XM_029453593.1:114..4037"
                     /db_xref="GeneID:115022564"
ORIGIN      
        1 mvkgdrvten apedstlteg svlaptpspv sifdhsteeq gtsppednag ggskhrvqyk
       61 plkhwkserg sgdhldltel igvplppfvs ftpghesfpa ynfgpdanig rltktfvpgs
      121 fyrdfaiivt vrpatqrggv lfaitdalqk vvelglaltp vrgglqsill yytdreqash
      181 shkaasfsvp dmteqwtrft lvvehdevrl ymdcgeaert tfhrsaerln fshnsgifva
      241 naggtgldkf vgslqqlvik ddpraaeeqc edddpyasgy tsgddalddr eteeeimknt
      301 herkhgtaqe dsvpvrappt eapeveldey sghqtsteat eeirgphmte epgersgdgh
      361 vrhglkgerg gpgprgppgp pghpgptplp gqaqpgprgt qgtpgasgsp glagrdgqqg
      421 nkgdkgdagq rgsqgfpgla geagtkgekg dqavgvpgpp glpgppgppr srsvpygada
      481 lgsgfedlds dtelirghpg lpgppgppgp pgplsdsded lstagapgtp gkdgltgkpg
      541 ipgpagkdgg pglpgvvgek geqglsgplg pkgecgslgt agssgppgps gpqgkrgpsg
      601 ppgppgppgt kffvedmegs gksdmligag vrgpqgppgl pgaqgpkged gatgapalsv
      661 kgepgdagpe glqgpaglpg argakgekgn lgpkgdqgvd glcipgppgp pgpiinlsdl
      721 llnvtdgifn fteirgppgs vgpeglpgra gfpgprgpkg dlgppgvqgp agfkgekgep
      781 gvtiaadgsl lsspkgpqgp kgikgdrgfp gssglmgpig psgqkgeygf pgrpgrsglp
      841 grkgdkadsv glpgprglpg ppgnpgkiig lkgtvfpvrp rphckmgrqs gtweesvgak
      901 gdkgdegipg epgtlapvfp egfvgargdq gyqgqkgekg dgglpgppgl pgrsglvgpk
      961 gesivgpqgp vgsvgqpgap gfgrpgsrgs pgpagppgya paygsdvnvp gppgppgptg
     1021 spgyanpvtt yktshalsre tqraaegtla yvsekggely irarngwrki qlgelihpgp
     1081 sssatsqsls rtgelsrpqr ihsqelqess rgyqpsynvl pqtfnavpgl hmvalntplk
     1141 gdmrgirgad fqcyqqarsm gltatyrafl sshlqdlati vrkadrtdmp vvnfrgevlf
     1201 sswmsifsgn ggtfnpstpi ysfdgrnvmt dsawpeklvw hgsntvgirl ttnyceawrt
     1261 adiavtgqaa llqtgrllgq htrscsnhyi vlcientyvg nkhqkrt
//