LOCUS XP_033345322 910 aa linear INV 16-APR-2020
DEFINITION E3 ubiquitin-protein ligase ZNF598 [Bombus vosnesenskii].
ACCESSION XP_033345322
VERSION XP_033345322.1
DBLINK BioProject: PRJNA623919
DBSOURCE REFSEQ: accession XM_033489431.1
KEYWORDS RefSeq.
SOURCE Bombus vosnesenskii
ORGANISM Bombus vosnesenskii
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Altocrustacea;
Allotriocarida; Hexapoda; Insecta; Pterygota; Neoptera; Eumetabola;
Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea;
Anthophila; Apidae; Bombus; Pyrobombus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_022882930.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bombus vosnesenskii Annotation
Release 100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..910
/organism="Bombus vosnesenskii"
/isolate="JDL3184/JDL3185"
/isolation_source="2 male haploid bees from laboratory
colony"
/db_xref="taxon:207650"
/chromosome="Unknown"
/sex="male"
/tissue_type="muscle"
/dev_stage="adult"
/geo_loc_name="USA: Oregon, Jackson County, Emigrant Lake"
/lat_lon="42.15236 N 122.62105 W"
/collection_date="26-Mar-2015"
/collected_by="Jonathan Koch"
/identified_by="James Strange"
Protein 1..910
/product="E3 ubiquitin-protein ligase ZNF598"
/calculated_mol_wt=102151
Region 2..>253
/region_name="COG5236"
/note="Uncharacterized conserved protein, contains RING
Zn-finger [General function prediction only]"
/db_xref="CDD:227561"
Site order(111,113,115..116,119..120,138,140,150..151,154..155,
165,177,179,181,183..184,187..188)
/site_type="other"
/note="putative nucleic acid binding site [nucleotide
binding]"
/db_xref="CDD:275368"
Region 130..166
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 172..190
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
CDS 1..910
/gene="LOC117231221"
/coded_by="XM_033489431.1:282..3014"
/db_xref="GeneID:117231221"
ORIGIN
1 msannesmnn ntcvvcyknv diysigmceh pvcyecstrm rvlccqnecp icrqdlpkvv
61 ftkeikpfnq lhkgnlldtr yniyfdtldi qskfydllan vcyickerpv fstfnslkdh
121 mrhqhelhyc dlcvenlkif sherrcytrs dlaqhrrkgd iddkshkghp lcefcdqrym
181 dndelfrhlr rdhlychfcd adglhqyyss ydylrdhfrq ehflceegmc aeekftsvfr
241 tdidlkahka svhskqlska aakqarmlel eftlaprgen rmnrrgmlgp stsrnsrdys
301 grdynlreyq qtvtpntsnv fmsnnepafv qqpsvdvqst eefptlgnta pivptlnqsk
361 grgnvtirst irpqplavtd enfpalgpes gstsisktvn fsvsssnasg lstqsqkstt
421 snvsiqvnhe pngtvttkvs gpnirirpaq fsmesfpalg saepstssnt nlahwkevlq
481 wtcsksasts apkpkkvasp plipspppiq sgedfptlsk sskskkqsti tvvpswsqaq
541 ssnnsnnakt ttditkgktk kkkvkqncnn ntangndgss sktnvstavv kkecetptss
601 pitnkthagq sssqsilkya ditnsentsk ninvqplkei eqinkkekkk hknadneavv
661 ntdidnnatn gvqrkrtelk idslnstnrn trhledfpal sgssskppgf tnpppgfgtt
721 tppppgfcik ynsmdkinns ngltftnssg esysilpdns khdsaynyvh ppefqkrnkc
781 lvakvnevlm qhdqieefry isglfrqgtc naqdyymhcr evmglsafen vfsellvllp
841 diekqqelfk vhqkesgnki kgleicatcg qvlkngsdfr thmtshtlen hfpalgknnv
901 lpqknswvrk
//