LOCUS       XP_034054972            1425 aa            linear   VRT 09-MAY-2020
DEFINITION  collagen, type XV, alpha 1b isoform X3 [Gymnodraco acuticeps].
ACCESSION   XP_034054972
VERSION     XP_034054972.1
DBLINK      BioProject: PRJNA629559
DBSOURCE    REFSEQ: accession XM_034199081.1
KEYWORDS    RefSeq.
SOURCE      Gymnodraco acuticeps
  ORGANISM  Gymnodraco acuticeps
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Notothenioidei;
            Bathydraconidae; Gymnodraco.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_022991738.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gymnodraco acuticeps Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Gymnodraco acuticeps"
                     /db_xref="taxon:8218"
                     /chromosome="Unknown"
     Protein         1..1425
                     /product="collagen, type XV, alpha 1b isoform X3"
                     /calculated_mol_wt=145909
     Region          139..328
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          <332..>514
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <456..>694
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <737..>968
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <854..>1096
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1147..1194
                     /region_name="Collagen_trimer"
                     /note="Collagen trimerization domain; pfam20010"
                     /db_xref="CDD:466257"
     Region          1248..1416
                     /region_name="Endostatin"
                     /note="Collagenase NC10 and Endostatin; pfam06482"
                     /db_xref="CDD:461931"
     Site            order(1276,1285,1291,1300..1301,1304,1366..1367,1377)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238151"
     CDS             1..1425
                     /gene="col15a1b"
                     /coded_by="XM_034199081.1:289..4566"
                     /db_xref="GeneID:117534843"
ORIGIN      
        1 mgalrlsfal fflsfspaqa qwwsfiwakp ktttismtsp ipsyitspsi tslgssdipg
       61 taewmlkedr vtekapeist ltegsvlppt ptpgveifgq stavpgtlpp kenagagska
      121 raqckllkhw ksergsgghl dlteligvpl ppsvsftpgh egfpaynlgp danigrltkt
      181 fvpgsfyrdf aiivtvrpas qrggvlfait darqkvvelg laltpvrggl qsillyytde
      241 eqashshkaa sfsvpdmteq wtrftvvveq devrlymdcg eaerttfhrr pkrlnfshns
      301 gvfvanaggt gldkfvgsiq qlvikddpra aeeqcedddp yasgftsgdd alddreseee
      361 mmkntherkq gtekegsvpv rappteapev eleefsgqqt tteatedmll kgphmtqepg
      421 eeprdghvrh gikgergspg prgppghpgp tplpgqaqpg prgtqgpaga pgspgqqgrd
      481 gqaghkgdkg dagqrgtqgl sgsdgeagsk gekgdqgvga pglpgppgpp rshsvsygad
      541 algsgfedld sdtelirghp glpgppgppg ppgplpsssa egfssgyagl pgkdgpqgkp
      601 glpmyedwfs gsgsdasgls sefssdlgsg fssgfssdpg fasgsgldfg sawgsgegla
      661 grngspglsg algekgeqgl agqpgpkgec gslgtngssg apgpsgppgk rgpsgppgpp
      721 gppwptkffv edmegsgksd mligtgvrgt qgppgihgpt gpkgedgatg apglsvkgep
      781 ggkgpegrqg paglpgarga kgekgnlgsk gdrgvdglsi pgapgppgpp gptinlpdll
      841 lnmtdgifnf tdirgppgav gpeglpgrag fpgprgpkgd vgpagvqgpl glkgekgepg
      901 vtiaadgsli saprgpqgpk glkgdrgfsg paglmgpigp ngqkgeygfp grpgrsgmpg
      961 rkgdkgdavg lsgppgppgq pglpgrvvgl kgtvfpvrpr phckmgrqsg tardsvgakg
     1021 nkgdigipge pgtpapefpd gvvgargdkg yqgqkgdkge glpgppglpg rsglvgpkge
     1081 sivgphgpvg pvgepgapgf grpgprgppg pagppgpasg ygsgasvpgp pgpqgptgsp
     1141 gnanamtvyk tsnalgreth rvaegtlayv sekggelfir arngwrkiql geliqsgpss
     1201 svtsqslsrt aersrphrih sqelqessrg yqpsynvlpq tfnavpglhl valnaplkgd
     1261 mrgirgadfq cyqqarsmgl tttyraflss hlqdlativr kadrtdmpvv nlrgevlfss
     1321 wmsifsgngg tftpstpiys fdgrnvmtds awpekqvwhg sntvgirlts nyceawrtgd
     1381 mavtgqaall qtgrllgqht rscsnhyivl cientyvgnt hqkrt
//