LOCUS XP_039935636 405 aa linear VRT 25-JUL-2023
DEFINITION proteasomal ubiquitin receptor ADRM1 isoform X1 [Hirundo rustica].
ACCESSION XP_039935636
VERSION XP_039935636.1
DBLINK BioProject: PRJNA713843
DBSOURCE REFSEQ: accession XM_040079702.2
KEYWORDS RefSeq.
SOURCE Hirundo rustica (Barn swallow)
ORGANISM Hirundo rustica
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
Passeriformes; Sylvioidea; Hirundinidae; Hirundo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_053465.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_015227805.2-RS_2023_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/19/2023
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..405
/organism="Hirundo rustica"
/isolate="bHirRus1"
/db_xref="taxon:43150"
/chromosome="16"
/sex="female"
/tissue_type="muscle"
/dev_stage="adult"
/geo_loc_name="Italy"
/collection_date="22-May-2018"
/collected_by="Giulio Formenti, Nicola Saino"
Protein 1..405
/product="proteasomal ubiquitin receptor ADRM1 isoform X1"
/calculated_mol_wt=42023
Region 23..127
/region_name="PH_Rpn13"
/note="Pleckstrin homology-like domain of Regulatory
Particle Non-ATPase 13; cd13314"
/db_xref="CDD:270124"
Site order(52..53,55,72..79,97..99,102)
/site_type="other"
/note="ubiquitin binding site [polypeptide binding]"
/db_xref="CDD:270124"
Region 273..379
/region_name="RPN13_C"
/note="UCH-binding domain; pfam16550"
/db_xref="CDD:465170"
CDS 1..405
/gene="ADRM1"
/coded_by="XM_040079702.2:77..1294"
/db_xref="GeneID:120759953"
ORIGIN
1 mssgalfpsl vpgsrgsssk ylvefragkm slkgstvtpd krkglvyiqq tddslihfcw
61 kdrtsgnved dliifpddce fkrvpqcttg rvyvlkfkag skrlffwmqe pktdkdeehc
121 rkvneylnnp pmpgalggna sgghelsalg gegglqsllg nmshnqlmql igptglgglg
181 glgaltgpgl asllgsggpp tsssssssrs qsaavtpsst tsstrvtpap svpaaasgts
241 pspvpssgng tssatsptqp iqlsdlqnil atmnvpsgag gqqvdlaavl tpeimapila
301 naevqerlmp ylpsgeslpq taeeiqntlt spqfqqalsm fsaalasgql gplmsqfglp
361 aeavdaankg dveafakamq nsvksdqkeg dskdkkdeee dmsld
//