LOCUS XP_044085812 441 aa linear MAM 13-OCT-2021
DEFINITION suppressor of cytokine signaling 4 [Neogale vison].
ACCESSION XP_044085812
VERSION XP_044085812.1
DBLINK BioProject: PRJNA769404
DBSOURCE REFSEQ: accession XM_044229877.1
KEYWORDS RefSeq.
SOURCE Neogale vison (American mink)
ORGANISM Neogale vison
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia;
Musteloidea; Mustelidae; Mustelinae; Neogale.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_058103.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Neovison vison Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..441
/organism="Neogale vison"
/isolate="M4711"
/db_xref="taxon:452646"
/chromosome="13"
/sex="female"
/tissue_type="tongue"
/dev_stage="mature"
Protein 1..441
/product="suppressor of cytokine signaling 4"
/calculated_mol_wt=50212
Region 58..109
/region_name="SOCS"
/note="Suppressor of cytokine signalling; pfam12610"
/db_xref="CDD:432667"
Region 277..377
/region_name="SH2_SOCS4"
/note="Src homology 2 (SH2) domain found in suppressor of
cytokine signaling (SOCS) proteins; cd10385"
/db_xref="CDD:198248"
Site order(285,287)
/site_type="other"
/note="Elongin-C binding interface [polypeptide binding]"
/db_xref="CDD:198248"
Site order(295,313,315,323,336)
/site_type="other"
/note="phosphotyrosine binding pocket [polypeptide
binding]"
/db_xref="CDD:198248"
Site order(346,348,366)
/site_type="other"
/note="hydrophobic binding pocket [polypeptide binding]"
/db_xref="CDD:198248"
Region 386..440
/region_name="SOCS_SOCS4"
/note="SOCS (suppressors of cytokine signaling) box of
SOCS4-like proteins. Together with CIS1, the CIS/SOCS
family of proteins is characterized by the presence of a
C-terminal SOCS box and a central SH2 domain. The general
function of the SOCS box is the...; cd03738"
/db_xref="CDD:239707"
Site order(387..392,398,405,411,416)
/site_type="other"
/note="putative elongin B/C interaction [polypeptide
binding]"
/db_xref="CDD:239707"
CDS 1..441
/gene="SOCS4"
/coded_by="XM_044229877.1:375..1700"
/db_xref="GeneID:122893081"
ORIGIN
1 maensesisk nvdvrpktsr srsadrkdgy vwsgkklsws kksescsdae tvnavektev
61 plrsqerkhs cssieldldh scghrflgrs lkqklqdavg qcfpikncsg rhssglpskr
121 kihiselmld kcpfpprsdl afrwhfikrh tapinsksse wvstdssqse lrdgqlkqrr
181 nveeevncfs qtnvqpcvit tnsasscrgg pvtgsvmnll snnsiedsdm dsddeiitlc
241 tssrkrnkpk wemdeeilql etppkyhtqi dyvhclvpdl lqinnnpcyw gvmdkyaaea
301 llegkpegtf llrdsaqedy lfsvsfrrys rslharieqw nhnfsfdahd pcvfhspdit
361 gllehykdps acmffeplls tplirtfpfs lqhicrtvic ncttydgida lpipssmkly
421 lkeyhykskv rvlridapeq c
//