KEGG T07382: 119378927

Rhipicephalus sanguineus (brown dog tick): 119378927

Entry

119378927         CDS       T07382

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1

K13100

pre-mRNA-splicing factor CWC22

Organism

rsan Rhipicephalus sanguineus (brown dog tick)

Brite

KEGG Orthology (KO) [BR:rsan00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsan03041]
    119378927
Spliceosome [BR:rsan03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    119378927
Complex C
   U4/U6.U5 tri-SnRNP related factors
    119378927

SSDB

Motif

Pfam:

MA3 MIF4G HEAT_5MP1_2 Cnd1 DUF7026 PRP38 INTS7_N

Other DBs

NCBI-GeneID:

119378927

NCBI-ProteinID:

XP_037503942

Position

1:267934518..268016385

AA seq 1013 aa
MADEKEQQAPERKVGGGPDCLLLGNESPLPEDVTGEKTSDSQDGPKQWDYFPWDRWSRER
STDSRERSVDSRDSATRERDLRYAEERKRDRERGRREEVILYRHRDSESTQSDSTEEEEA
ESSNESKVKAPASTAVNESAENKRTFSKEAVPLPLSHSERTEHSTALAKHAHQKAAKASK
SPPTSKEASKRTELAKEASEGSTCAANKKNGTGDQKGSGDSHSKTSRNGNKGPPTKEARH
AVSDESSDSENDHVRHTDHDRRKERRRDADADHKRVDPERRRSDAAHDHQRDSDHHRRQD
RGHDRRREHDRNRDRDRKESHEQGWRGDQHRRDDHKLNRREGRSESHRDENSRRDDHKND
RDRNQRDEQKDHQRDDRRDDRRGDPRGDRRRDDRREDRRGDRRDDKQLGDLRTDHSGRGV
REESVGHKRVRRSSPDAEAEPPRKKDVITGRTGGAYIPPARLRMMQQQITDKSSVEYQRI
AWEALKKSINGLVNKANVGNIDVIIKELMRENLVRGRGLLCRTIMTAQAASPTFTHVYAA
MVAVINTRFPQTGELILKRLVIQFRRSFRRNDKLTCMASVRFIAHLLNQQVAHEVLALEI
LTLLLGNSTDDSVEVAVAFLKECGMKLTELTPKGVHAIFERLRSILHEANLDKRVQYMIE
VMFAIRKDGFSAHPSVVKELELVEEESQYTHLLALDDTLDGEDMLNVFKFDPEFAENEER
YAEIAKDILGSDDEGDGSGGDDSDDEEEEEEEQAEENGEIIDNTETNLVALRRTIYLTIQ
SSLNFEECAHKLLKLELKPGQVGEMCHMILDCCAQQRTYEKFFGLLAQRFCQLKKDYAEP
FEQIFLSSYDTIHRFETNKLRNVAKFFAHLLFTDAIPWNVLSHIKLTEDDTTSSSRIFIK
ILFQELCEYMGLPKLNERIKDPTLQDAFEGLFPRDLPKNTRFAINFFTSIGLGGLTADLR
EHLKSAPKPAPVSDTIAVPAAPAKKKSTSSSSDSSSDSSSSDSSSDSDSESSS

NT seq 3042 nt +upstreamnt +downstreamnt
atggctgatgaaaaagaacaacaagcaccggaacgcaaagtaggcggtggtccagactgt
cttctactgggaaacgagagccctctgccagaggatgtgaccggtgaaaagacgtcggac
tcccaggacgggccaaagcagtgggactacttcccatgggatagatggtcacgtgagagg
agcacagactctagggaaaggagtgtggactctcgtgactcagcaacaagggagagggat
ctacggtatgccgaggaacggaaacgtgaccgcgaacgtggccgccgggaggaggtcatc
ctgtatcgtcacagagactctgaaagcacccagagtgatagtactgaagaggaggaggca
gaaagctcaaatgaaagcaaagtgaaggctcccgcatccactgctgtgaatgaaagtgct
gaaaacaaaagaacattttcaaaggaagctgttcctctaccactgagccattctgagagg
actgagcatagtacagcgctggcaaagcacgcccatcagaaggcagccaaagcttccaag
agtccacctaccagcaaggaagcctcaaagcgcacggaacttgccaaagaggccagtgag
ggttctacatgtgcggctaacaagaaaaatggaactggtgaccagaaaggatctggtgac
agtcacagcaaaacatcaagaaatggcaacaaaggtccaccaacgaaggaggctcgtcat
gccgtgtcagatgaaagtagcgactccgaaaatgatcatgtcaggcatactgaccatgac
cgaagaaaagaacgcagacgagatgcagatgcagaccacaaaagagttgatcctgaaaga
cggcgcagtgatgctgctcatgatcaccagcgggattctgaccatcacagaaggcaggac
aggggccatgaccggagacgtgaacatgacaggaacagagacagggaccggaaagaaagc
catgagcaaggttggagaggggatcagcacaggagggatgatcacaaactcaaccggaga
gaaggtcgcagtgagagccatagagatgagaatagcaggagagatgatcataagaacgat
cgagatcgcaatcagagggacgaacaaaaagatcatcaaagggatgatagaagagatgac
cgaagaggtgacccaagaggcgatcggaggagggatgaccgaagagaggatcgaaggggt
gatagaagagatgacaagcaacttggtgatttgagaactgatcatagtggaaggggcgta
cgggaggagtcagtggggcacaagcgagtgcggagaagttctcctgatgcagaggctgag
ccaccacggaaaaaggatgtgatcacagggcgcactggtggtgcttacataccacctgca
cgccttcgcatgatgcagcagcagattacggacaagtctagtgtggaatatcagcgaatt
gcttgggaagcgctgaaaaagagcattaatggcttggtaaacaaagcaaacgtggggaac
atagatgtcataatcaaagagctgatgcgggagaaccttgttcgtggaaggggcctttta
tgccgcacaatcatgactgcccaggcagcatcacccaccttcacgcatgtttatgcagca
atggtggcagtcataaacactaggtttccccagacaggggagcttatactcaagagactg
gtcatccagttcagacgatcatttcggcgaaatgacaagcttacgtgcatggcttctgtg
cgtttcattgcgcatcttttgaatcagcaagtggctcatgaagtattggccctggaaatc
ttgacactcctccttggaaactcgaccgatgactctgttgaagtggccgtggcatttcta
aaggagtgcggcatgaaactgactgagctcacaccaaaaggagttcatgccatatttgaa
cgtttgagaagcattcttcatgaagcaaatttggacaaacgagtgcagtacatgattgaa
gtcatgtttgctatacgcaaagatggattttctgcccatcccagtgttgtgaaggagctt
gaattggttgaagaggagagccaatacactcacttactggctttggatgacacattggat
ggggaggatatgttgaatgtattcaagttcgacccggagttcgctgaaaacgaagagaga
tatgcagagatcgcaaaagatatattgggcagtgatgatgaaggtgatggctccggaggt
gatgactctgatgatgaggaggaggaggaggaagagcaagctgaagagaatggtgagata
atagacaacactgagactaacctggtggcactcagacggaccatttatttgacaattcaa
tcaagcctcaactttgaggaatgcgctcacaagttgctgaagcttgagctcaaacctgga
caagtgggtgaaatgtgccatatgattcttgactgctgtgctcagcagcgcacatacgag
aagttttttggactgttggcccagcgtttctgccagttgaaaaaggattatgcagagcct
tttgaacagattttcttgagttcatacgacaccattcaccgttttgagacaaacaagctg
cgcaatgttgccaagttctttgcccaccttcttttcacagatgccattccgtggaacgtt
ctgtctcacatcaagcttaccgaagatgacactacatcatccagccgtatcttcatcaaa
atattgtttcaagaattatgcgagtacatgggactaccgaaactgaatgaaagaataaaa
gatccgacactgcaagatgcttttgaaggtctctttccgagagacttgcccaagaacact
cggtttgccattaatttcttcacgtctattggccttgggggactgacggctgacctacgc
gagcacctgaaatcagctccaaagccagcaccggtttcggacacgattgctgtaccagca
gctccagcaaagaagaagtctacgtcatcaagcagtgattccagtagtgattcaagtagt
agtgactccagtagtgactcagacagtgaatccagcagttga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system