KEGG   Raphanus sativus (radish): 108858872
Entry
108858872         CDS       T06014                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 10, mitochondrial-like isoform X1
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00900  Terpenoid backbone biosynthesis
rsz01100  Metabolic pathways
rsz01110  Biosynthesis of secondary metabolites
Module
rsz_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    108858872
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rsz01006]
    108858872
Enzymes [BR:rsz01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     108858872
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     108858872
    2.5.1.29  geranylgeranyl diphosphate synthase
     108858872
Prenyltransferases [BR:rsz01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   108858872
SSDB
Motif
Pfam: polyprenyl_synt UbiA
Other DBs
NCBI-GeneID: 108858872
NCBI-ProteinID: XP_018488232
UniProt: A0A6J0NTW6
Position
Unknown
AA seq 351 aa
METQEAFVYTLISILLSLLLLFWRFLWLSYIAVTSTPTPQLTSHSLTAESDETEFMSYMV
RKSKTVNKALDEAVPLGEPVLKIREAMRYTLLSDGKRVRPMLCLAACELVGGHEATAMPS
ACAVEMIHASSIILDDLPCMDDDSLRRGKPTNHKVFGEDIAILASVALMGLAVKQTSSST
GAPPERVLRAVQVMAQAVGTEGLVAGQAEDLAGEGMSFEENDEAGLKHLEFIHIHKTASL
LEAAAVVGAIVGGGSDDEIERLRKYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDVMAG
KLTYPKVMGVEKSREYAERLNREAREHLRGFDSDKAAPLLFLADYIVKRQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggaaactcaagaagcttttgtttacactctcatctccatccttctttctctcctatta
ttattttggagattcctatggctgtcttacattgcggttacgtctacgcctacgccacag
ctgaccagccactctctgacggctgaaagcgacgaaactgagtttatgtcgtatatggtc
cgtaagtccaagaccgtcaataaggcactcgacgaggccgttccacttggcgaaccagta
ctcaagatccgtgaggccatgaggtatacgcttctctccgacggcaaacgcgtaagacca
atgctttgtttggctgcatgcgagctcgtgggtggccatgaggcaaccgcaatgccttct
gcatgtgcagttgagatgatccacgcgtcgtctatcatcttagacgacctcccttgtatg
gacgacgacagcctccgccgcggaaaacccaccaaccacaaagtatttggcgaggatata
gccatcttggcctcggttgcactcatgggtttggccgtcaaacagacctcttcatccact
ggtgctcctccagagagggttctccgggctgttcaggtgatggcgcaagcggtgggaaca
gaaggactcgttgcgggacaagctgaggatcttgccggagaagggatgagcttcgaggaa
aatgatgaagcggggctgaaacatcttgagtttatacatatccataaaacggcgtcgttg
cttgaagctgctgcggtggtgggagccatagtgggaggtggctctgatgatgagattgag
aggcttaggaaatacgcgagatgtattggactgatgtttcaagtggtggatgatgtgctc
gatgtgactaagtcgtcagaggagctggggaaaaccgctggtaaagatgtgatggctggg
aagctgacgtatccgaaagtgatgggagtggagaagtcgagagaatatgcagagaggttg
aacagagaagccagagagcatcttcgtgggtttgattcagacaaggcagctcctcttttg
tttctggctgattacattgtcaaaagacaaaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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