KEGG   Rissa tridactyla (black-legged kittiwake): 128909836
Entry
128909836         CDS       T09443                                 
Symbol
RAB11FIP5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128909836 (RAB11FIP5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtd04131]
    128909836 (RAB11FIP5)
Membrane trafficking [BR:rtd04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    128909836 (RAB11FIP5)
SSDB
Motif
Pfam: C2 RBD-FIP REXO3_N
Other DBs
NCBI-GeneID: 128909836
NCBI-ProteinID: XP_054058101
Position
5:39846098..39890863
AA seq 1523 aa
MALLRAAALPAEGSPAWLPTHVQVTVVQARGLRCKGGGGGKPGTSDAYTIIQLGREKYST
SVAEKSTGNPEWREECAFELPPELGTPAGLARGGLVLTVMHRALVGMDRFLGQALVPLEP
ALQQGRAPDERWHKLHSKAGKKEKERGEILVSIQFTRNNLTASMFDLSMKDKPRSPFGKL
KDKVKGKKKYDLESASAIIPSSMGALDMEDDYDVGGKKSKVKGFFLKNKLRKSSLTQSNT
SLGSDSTISSASLGLAANVPEVTKSPSRHSSLSTERSVKDYLPSPKLTHKRAFSDDVSQV
SPVLEPKAIQNLKPKNDPVSRSSLCINGSHVYSDEPAPKSPVSVPQSSAPPSVPSVPRRQ
EEGFGFTPLHPDSHEVPWGISNLERTQQRDEPRFIPSPPSLALQEELKVSTKAVTLSNHL
GRAKMEENSRLENKPTQAATPMVFSTETTKDKQPEETRKEDKKVKGGLFHQGGNKSDVGS
KAQGEKVGPSHGSSVHATPGRDERSKTSGWFGSKEPKESPQKPSFPSGPHASTEVAGSFY
SPEDCSPSASLRHKDPERESPDKSICVPVPETTPPSQGDLPPPDEKHAIPPSLSEWDDTF
DAFATSRLKPELKKENFFASVVAEGMAFIDDPDAASPTERLAEPAHEKGTKVFEKADSQI
SSEMPTTLRSWTNFSSLDVGANLVSTTQEATVIEDVLSPVSAGSVGRRRKSSTPTVWTAA
FASGNPGEKETSTPLTAENSSREEGDSNEEEPSSAGTNGWMTIATETAPDLSESTQSMAE
QEHVGQERAFSPRPAFLSEGAFEAKSGSRAAACVLPRSTFTPELTSETLPGSNVAAVPPR
VLADVAAQRFPMAPEPGMEPQGAGSEEEAFDIRTSVYRLQASMRLEASESRVKLSSDIRE
RRVILSSRTGTREREEMAAGSAVPPPKPPRWFAATGSGGDGEDEDVCDPQLRQRGSAEQW
EDAESLKADVELPRSRLSSEPSVPASPSPPALGADIDEAESEFPVSKDAESATAVSAANL
EARASELAKRDTSLGEDCSEMDETDAAEQFETCPSKFSLDGLSQSGAKESWSQPGLSPLM
GAADNAKWEMASEQEPFPEELSMSGLNPPSKLDLGQPEIFWTALEEQEAAGHPAGLGPAA
RPQRLARGESPPQPEPVWGDGEGQHGPGASPTGQAGVQSESYVPVAVASPPQEAEQGRSF
ASKPDGPWRRGSADRIDFKKADFWKPDRAEERHKQDTLAPRNPFALTLSPNAPSNPFVEK
PPDPLPVQAVLPERLRQGGFSFTSHHEEALGQGFQPTNLPGDPLGKPPFLHDSQPLAFST
PFLVAATNPKQFDFPSPVACPASSGVPAATSHAAAQPCPLPQSGDTQASALVVLPRETQP
AEKPFFQQMTSPHPVKPISAAVQEVSSEKKQQHRSSLTTALSNGLEKLKTVTTSSVQPVA
PSSHTEKTDSKKLKDPTVLDQSAKYYHLTHDELIQLLLQREKELSKKEEHIHELENYIDQ
LLVRIMEQSPTLLQIPLGESKTK
NT seq 4572 nt   +upstreamnt  +downstreamnt
atggcgctgctgcgggcggccgcgcttcccgctgaggggtctccggcctggctgcccacc
cacgtccaggtgacggtggtacaggcccgtgggctgcggtgcaagggcggcggcggcggc
aagccgggcaccagcgacgcctacaccatcatccagctgggccgcgagaagtacagcacc
tcggtggccgagaagagcaccggcaacccggagtggcgggaggagtgcgctttcgagctg
ccccccgagctgggcaccccggcgggcctggctcgcggcggcctggtgctcaccgtcatg
caccgggccctggtgggcatggaccgcttcctgggccaggccctggtgcccctggagccc
gccctgcagcagggccgcgcgccggacgagcggtggcacaagctacactccaaggctggg
aagaaggagaaggagcgtggtgagatcctggtgagcatccagttcacacgcaacaacctt
acagccagcatgtttgacctgtccatgaaggacaagccacggtcgccttttggcaagctg
aaggacaaggtgaagggcaagaagaaatatgacttggagtcagcctctgccatcatcccc
agcagcatgggcgccctcgacatggaggatgactatgatgttgggggcaagaagtccaaa
gtcaagggcttcttcttgaagaacaagctgcgcaagtcgtccctgacgcaatccaacacc
tccctgggatccgacagcaccatctcttctgccagcctgggcttggctgcaaatgttccc
gaggtaacaaaatccccaagcagacacagcagtctgtccaccgaacgctctgtgaaagac
tacttgccatctccaaagctgacccacaagagagcattcagtgacgatgtctcccaagtc
agccccgtcctggagccaaaagcaatccaaaacctgaagccaaagaatgatcctgtgtcc
cggtcttccctctgcatcaatggaagccacgtttacagcgacgagcctgcaccaaagagc
cccgtgtctgtccctcagagctctgcgccaccatctgtgcccagtgttcccagacggcag
gaggagggcttcggcttcacccccctccatcccgactcccacgaggtgccttgggggatc
agcaacttggagaggacacagcagagagacgagcccaggttcatcccatctcctcccagc
ttagccttgcaagaagagctcaaggtttccacaaaagctgtcactctcagtaaccatctg
ggcagagccaagatggaggaaaacagtcgcttagagaacaagccgacacaagctgcaaca
cccatggtcttctccacagagacgacgaaggacaaacaacccgaggaaacaaggaaggaa
gacaagaaagtgaagggtgggctcttccatcaagggggcaacaagagtgacgtggggagc
aaagcacagggggagaaagtgggaccctcccatggctcgtccgtccacgcgacaccaggg
agagatgagaggagtaagaccagtggctggttcggttcaaaggagcccaaagagtcccct
cagaaacccagtttcccgtctgggccgcatgcttcaacagaggtcgctgggagcttttat
tccccagaggattgcagtccctctgcctccctaagacataaagacccggagagggagtct
ccagacaaaagcatttgtgtccccgttccagaaactactcccccatcacaaggagacctt
cctcctccagatgagaaacatgccatccctccttccctctcggagtgggatgataccttc
gatgcctttgcgaccagcaggctcaaaccagaactgaagaaggaaaacttctttgcttcg
gtggtggcagagggcatggctttcatcgatgatcccgatgcagccagcccaacagaaaga
ctggctgagccagctcatgagaaggggacaaaggtatttgaaaaggctgattcacaaatc
agcagcgaaatgcccacaactctgcggtcttggacaaatttctccagtttagatgtgggg
gcaaacttggtgagcacaacccaggaagcgactgtgatagaggatgtgctgagccccgtg
tctgcggggtcagtgggaaggaggaggaaaagcagcacacctacggtttggacagccgca
tttgcatcgggaaatccaggggaaaaagagacttcaacaccactaactgctgaaaatagt
tctagggaggaaggggacagtaatgaggaggaaccctctagtgcagggacaaatggatgg
atgaccatagccactgaaactgctcctgatctgtcagagagcacccaaagtatggctgag
caggagcatgtgggtcaggagcgcgcgttcagcccgcggccagccttcctcagtgaaggt
gcctttgaagcgaagagtggatctcgtgccgccgcttgtgtattgcccagaagcaccttc
acccccgagctcacctctgaaaccctgccaggcagcaacgtggcggctgtgcccccacgg
gtgctcgcagatgtggcagcacaacggttccccatggcccccgagccagggatggagccc
caaggtgctggtagtgaggaggaagcgtttgacatacggacttcagtctaccggctccag
gctagcatgcggctcgaggccagtgaaagccgtgtaaaactcagctctgacattcgcgag
aggcgcgtcatcctctcttcgcggacaggtacccgagaaagggaggagatggcagccggc
tcagctgtgccacccccgaaacctccaaggtggtttgcagccacgggcagtggaggagat
ggcgaggacgaggatgtttgcgatccgcagctgaggcagcgaggcagcgcggagcaatgg
gaagatgcagagagcctgaaggcagatgtagagctgccaaggagtcgtctgagcagcgag
ccctctgtcccagcatctcccagcccgcctgcactgggagcggacatagatgaagctgag
agcgaattcccagtctccaaggatgctgaatctgccacggcggtctcagcagctaatttg
gaggcaagagctagcgagctggcaaaaagagacacctctttgggggaagactgctcagag
atggatgagacggatgcagctgagcagtttgagacttgcccatcaaagttctccctagat
ggattaagccagtcgggtgccaaggagagctggagccagccaggtttatcccctctgatg
ggggctgcagacaatgccaagtgggagatggcctccgaacaggagccgttccctgaggag
ctcagtatgtcgggactaaacccaccttccaagctggacctgggccagccggaaatcttc
tggacggctctggaagagcaggaggcagctggtcatcccgcgggtcttggcccagcggcg
cgaccccaaaggttagctcgtggggagagtccaccccagccagagccggtgtggggtgat
ggtgaggggcagcatgggccaggggccagccccactgggcaagcgggagtccagtctgag
tcttacgtccctgtggcagttgctagccctccccaggaggcagagcaaggcagatccttt
gccagcaagcctgatgggccatggcgccgaggctcagcagacaggatagacttcaagaag
gctgatttttggaagcctgatagggcagaggagaggcacaagcaggacactttggccccg
agaaatccctttgctctgacactcagcccaaatgccccaagcaatccctttgtggaaaag
ccaccagaccccctccctgttcaagctgtgctgcccgaaaggcttcgtcagggaggcttc
agcttcaccagccaccacgaggaagcccttgggcaaggcttccagcccactaaccttccc
ggagacccgctaggcaagcctcctttcctgcatgacagccagcccttggccttctccacc
cctttccttgtggctgcaactaaccctaaacagtttgatttcccttcccctgttgcgtgc
cccgcgagcagcggggtccctgccgcgaccagccatgcagccgcccagccctgccctttg
ccgcagtccggtgacacacaagcttcagcgctcgtggttttgcccagggagacacagcca
gctgagaagccctttttccagcagatgaccagtcctcacccagtgaaacccatcagcgct
gcagtgcaagaggtctccagtgagaagaagcagcagcacaggtccagcctgacgactgct
ctgagcaatggcctggagaaactgaagacggtcaccacgagcagtgtccagcctgtggcc
ccatcctctcacacagagaaaacggactcaaagaagttaaaggatcctaccgtactggac
cagtcagccaagtattatcacttgacccacgatgaactcatccagctcctgctgcagaga
gagaaggagctgagcaagaaggaagagcacatccatgaactggagaactacattgaccag
ctgctggtgcgcatcatggaacagtctcccacactcctccagatcccgctgggggaaagc
aagaccaagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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