KEGG   Rissa tridactyla (black-legged kittiwake): 128916823
Entry
128916823         CDS       T09443                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04145  Phagocytosis
rtd04517  IgSF CAM signaling
rtd04540  Gap junction
rtd04814  Motor proteins
rtd05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    128916823 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    128916823 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    128916823 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    128916823 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128916823 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtd03036]
    128916823 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtd04812]
    128916823 (TUBB1)
   04147 Exosome [BR:rtd04147]
    128916823 (TUBB1)
Chromosome and associated proteins [BR:rtd03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     128916823 (TUBB1)
Cytoskeleton proteins [BR:rtd04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    128916823 (TUBB1)
Exosome [BR:rtd04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128916823 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   128916823 (TUBB1)
  Exosomal proteins of bladder cancer cells
   128916823 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 128916823
NCBI-ProteinID: XP_054074860
Position
12:960406..965022
AA seq 449 aa
MREIVHLQIGQCGNQIGAKFWEVISDEHGIDIAGNYRGDASLQLERINVYFNEAYSHKYV
PRSILVDLEPGTMDSVRSSKIGPLFRPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVV
RNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALSVPELTQQMFDARNMM
AACDPRRGRYLTVACIFRGRMSTREVDEQLLAVQTKNSSYFVEWIPNNVKVAVCDIPPRG
LKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYTGEGMDEMEFSEAEGNTNDLVS
EYQQYQDATADVEEYEEVEVEASPEKEAA
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcgtgcaccttcagatcggccagtgcgggaaccaaattggagctaagttc
tgggaggtgataagtgatgaacacggcattgacatcgctggaaactaccgtggggatgcg
tcgctgcagctcgagcgaattaacgtctacttcaatgaggcttactcccataaatacgtg
ccccgttctatcttggtggacctggagcccggtacgatggacagtgtacggtctagcaaa
ataggcccactctttcgccctgacaatttcattcatggaaattcaggcgctggaaacaac
tgggccaagggccactacacagaaggcgctgaactgattgagaacgtcatggatgtggtc
aggaatgagtgtgagagctgtgactgccttcagggcttccagctcatccattcactgggg
ggtggtacaggctcaggtatgggcacactcctcatcaacaaaatccgagaagaatatcct
gacaggatcatgaacaccttcagtgttgtgccttcacccaaagtgtccgacacagtcgta
gagccatataacgccattctctccatccatcagctaatagagaatacagatgaaaccttt
tgcattgacaacgaagctctatacgatatatgttttaggactttaaagctcaccaacccc
acctacggtgacctcaaccacctagtgtccctaaccatgagtggtgtcacaacctccctc
cgctttcctggtcagctgaatgcagatctgcggaagctggccgttaacatggtgcccttt
cctcgcctccacttctttatgccgggctttgctccactgacggctcgaggcagccaacag
tacagagccctctcggtgccggagcttactcagcagatgtttgatgcccgcaacatgatg
gcagcctgcgaccctcgtcgtggccggtacttgaccgtggcgtgcatcttcagaggccga
atgtctaccagagaggtggatgagcagctgctggctgtccagaccaagaatagttcctac
tttgtggagtggatccctaataatgtcaaagtggccgtgtgtgacatacccccgcgagga
ctgaagatggcagcgacctttattggcaataacacagccattcaggagctcttcatcagg
gtttccgaacagttctcagccatgttcagaagaaaagcgtttctccactggtacacgggg
gaaggcatggatgagatggaattttctgaagcagaaggtaacaccaatgacctcgtgtcc
gagtaccagcagtaccaggatgccactgcagatgttgaggaatatgaagaggtagaagtg
gaagccagcccggaaaaggaagcagcataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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