KEGG   Remersonia thermophila: 98127663
Entry
98127663          CDS       T10833                                 
Symbol
VTJ83DRAFT_6320
Name
(RefSeq) hypothetical protein
  KO
K11824  AP-2 complex subunit alpha
Organism
rthe  Remersonia thermophila
Pathway
rthe04142  Lysosome biogenesis
rthe04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    98127663 (VTJ83DRAFT_6320)
   04142 Lysosome biogenesis
    98127663 (VTJ83DRAFT_6320)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rthe04131]
    98127663 (VTJ83DRAFT_6320)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rthe04147]
    98127663 (VTJ83DRAFT_6320)
Membrane trafficking [BR:rthe04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    98127663 (VTJ83DRAFT_6320)
Exosome [BR:rthe04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   98127663 (VTJ83DRAFT_6320)
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2
Other DBs
NCBI-GeneID: 98127663
NCBI-ProteinID: XP_070863947
JGI: Remth1_6320
UniProt: A0ABR4D4G7
Position
6:join(524221..524372,524450..524507,524582..524871,524948..527249,527350..527526)
AA seq 992 aa
MSSSVGTGFLGRSSSSNANMRGLVQFIADLRNARARELEEKRINKELANIRQKFKDGNLS
GYHKKKYVCKLLYIYILGWNVDFGHLEAVKLISATKYSEKQIGYLAMTLFLHEKHELLHL
VFNSIRKDLVDHNELFNCLALHAIANIGGREMGEVLSGDVHSLLISPTSKSFVKKKAALT
LLRLYRKHPAIVQPQWAERIVSLMDEPDLGVALSVTSLVMALAQDDLEAYKGAYVKAASR
LKRIVIDGEFTPDYLYYKVPCPWIQVKLLRLLQYFPPSEDGHVRGMIRESLQKILDLALE
TNKNVQQNNALNAVLFEAINLIIHLDTEHDLMKQISSRLGRFIQSRETNVRYLGLEAMTH
LAARADTLDPIKQHQDIIIGSLKDRDISVRRKGLDLLYSMCDASNARTIVAELLHYLQNA
DFAIREEMVLKIAILTEKYATDVQWYVDISLRLIAMAGDHVSDEVWQRVIQIISNNEELQ
VYAARNTLQYCKQDHCHETLVKIGAYILGEFGHLIAEERGCSPIEQFLALQNKLPACSSS
TRGMVLSAFVKFVNLFPEIKPQLLNTFSVYSHALDPELQQRACEYLALATMPTDDLLRTV
CDEMPPFPERESALLSRLHQKHAKTSDKRTWVVGGKDANADAAELSMAIKPGGLKRAFTT
QGPVPGAPANGSSSAANDLAGLDMSGGGAAAAADAAKPSKPPNLASAAHLSPGWERGYNR
LMLRADGVLYEDGQIQVGVRSEYRGQMACLILYLTNKTPALITSVTTTLDLDEAERPNLG
WDIKGLPDPTLSQGGQTQQVVLFEAKRVFAKSPTIRVSYIAGALQALTLMLPVALHKFMD
PAELSADDFFKRWKQIGGAPREAQAIFGLAAAAKHAERELTEGFVRAVVEGFRWGVLNGV
DPNPRNFVGASVVHTSEGGKFGCLMRLEPNYASQMLRLTIRATDEALPPVLLSLMQKQLE
RGVATTQERPPPPTVQEISDAFRNVMVTTSSR
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgtcgtcttccgtgggcaccggcttcctcggccgctccagcagcagcaatgccaacatg
cgcggcctggtccagttcatcgccgacctgaggaacgcccgcgcccgcgagctcgaagaa
aagcgcatcaacaaggagctggccaacattcggcaaaagttcaaagacggcaacctcagc
ggttaccacaagaagaaatacgtttgcaagctcttgtacatctacatcctcgggtggaac
gtcgactttgggcacctcgaggccgtcaagcttatttcggccaccaagtactcggagaag
cagatcggctacctcgccatgacgctgttcctccacgagaaacacgagctcctgcacctc
gtcttcaacagcatccggaaagacctggtcgaccacaacgagctgttcaactgcctcgcg
ctgcacgccattgccaacattggcggccgggaaatgggagaggtgctcagcggcgacgtg
cacagcctgttgatctcaccaacctccaaatccttcgtcaagaaaaaggccgccctcacc
ctgctccgcctctaccgaaagcaccccgccatcgtccagccgcaatgggccgagcgcatc
gtctcgctcatggacgaaccggacctgggcgtcgccctctcggtgacgtccctggtcatg
gccctcgcccaggacgacctcgaggcgtacaagggcgcctacgtcaaggccgcctctcgc
ctcaagcgcatcgtcatcgacggcgagttcacgcccgactacctgtactacaaggtgccg
tgcccgtggatccaggtcaagctgctgcgcctgctgcagtacttccccccgtccgaggat
ggccacgtccgcggcatgatccgcgagtcgctgcaaaagattctggacctcgccctcgag
accaacaagaacgtgcagcagaacaacgcgctcaacgcggtgctgttcgaggccatcaac
ctcatcatccacctcgacacggagcacgacctcatgaagcagatctcgtcgcggctcggc
cgcttcatccagtcgcgcgagaccaacgtgcggtacctgggcctcgaggccatgacgcac
ctggcggcgcgggccgacacgctggaccccatcaagcagcaccaggacatcatcatcggg
tcgctcaaggaccgcgacatcagcgtgcggcgcaagggcctcgatctcctgtacagcatg
tgcgacgcgtccaacgcgcgcaccatcgtggccgagctgctgcactacctgcaaaacgcc
gactttgccatccgcgaggaaatggtgctcaagatcgccatcctgacggaaaagtacgcc
accgacgtgcagtggtacgtggacatttcgctgcgcctgatcgccatggccggcgaccac
gttagcgacgaggtctggcagcgcgtcatccagatcatctccaacaacgaggagctccag
gtctacgccgcccgcaacacgctgcagtactgcaagcaggaccactgccacgagacgctc
gtcaagatcggcgcctacatcctgggcgagttcggccacctcatcgccgaggagcgcggg
tgcagccccatcgagcagtttttggcgctgcaaaacaagctgcccgcctgctcgtcgagc
acccgcggcatggtgctgtcggcctttgtcaaattcgtcaacctcttccccgagatcaag
ccgcagctgctcaacacgttcagcgtctacagccacgcgctggacccggagctgcagcag
cgcgcctgcgagtacctggccctggccaccatgcccaccgacgacctgctgcggaccgtc
tgcgacgagatgccccccttcccggagcgcgagtcggccctgctctcccgcctgcaccaa
aagcacgccaagacgagcgacaagcgcacctgggtcgtcggcggcaaggacgccaacgcc
gacgcggccgagctctccatggccatcaagcccggcggcctcaagcgcgcgtttacgacc
cagggcccggtgccgggagcccccgccaacggaagcagctcggcggccaacgacctcgcc
ggcctcgacatgagcggcggcggcgccgccgccgccgccgacgcggccaagccgtccaag
ccccccaacctcgccagcgccgcccacttgtctcccggctgggagcgcggctacaaccgg
ctcatgctccgcgccgacggcgtgctctacgaggacgggcagatccaggtgggcgtgcgg
tccgagtaccgcgggcagatggcgtgcctgatcctgtacctcaccaacaagacgccggcg
ctcatcacgtcggtcacgacgacgctcgacctggacgaggcggagcggccgaacctgggg
tgggacatcaagggcctgccggacccgacgctgagccagggcgggcagacgcagcaggtg
gtgctcttcgaggcgaagcgcgtctttgccaagtcgccgaccatccgggtgtcgtacatc
gcgggcgccctgcaggcgctgacgctgatgctgcccgtcgcgctgcacaagtttatggac
ccggccgagctgtcggccgacgactttttcaagcgctggaagcagatcggcggcgcgccg
cgcgaggcccaggccatctttggcctggccgccgccgccaagcacgccgagcgggagctg
acggaagggttcgtccgcgccgtggtggaagggttccgctggggggtgctcaacggggtg
gatcccaacccgaggaactttgtcggcgccagcgtggtgcataccagcgaggggggcaag
tttgggtgcttgatgcggctggagccaaactatgcgagccagatgctccgcttgacgatt
cgcgcgacggacgaggcgctgccgccggtgctgctgagcctgatgcagaagcagctcgag
aggggggtggcgacgacccaggagaggccgccgccgccgacggtgcaggagatctcggat
gcgtttcggaacgtgatggttacgacgagcagccggtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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