KEGG   Rhincodon typus (whale shark): 109938363
Entry
109938363         CDS       T06055                                 
Name
(RefSeq) tubulin beta-4 chain-like isoform X1
  KO
K07375  tubulin beta
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04145  Phagocytosis
rtp04517  IgSF CAM signaling
rtp04540  Gap junction
rtp04814  Motor proteins
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109938363
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109938363
  09144 Cellular community - eukaryotes
   04540 Gap junction
    109938363
  09142 Cell motility
   04814 Motor proteins
    109938363
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109938363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtp03036]
    109938363
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    109938363
   04147 Exosome [BR:rtp04147]
    109938363
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     109938363
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    109938363
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109938363
  Exosomal proteins of colorectal cancer cells
   109938363
  Exosomal proteins of bladder cancer cells
   109938363
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 109938363
NCBI-ProteinID: XP_020392366
Position
19:complement(55786771..55801971)
AA seq 448 aa
MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDLKGNYIGDSDVQLERINVYFNEAHGNKYV
PRAILVDLEPGTMDSIRGSHIGHMFRPDNFIYGNSGAGNNWAKGHYTEGAELVENVLDVV
RNECESCDCLQGFQITHSLGGGTGSGMGTLIMNKIREEYPDRIMNSFSIVPSPKVSDTVV
EPYNATLSIHQLIENTDSTFCIDNEALYDICFRTLKLATPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDPRNMM
AACDPRHGKYMTVATIFRGRMSTKEVDEQMLAIQAKNSTYFVEWIPNNVKVAVCDIPPRG
LKMSSTFIGNNTAIQELFKRISEQFSVMFQRKAFLHWYTGEGMDEMEFTEAECNTNDLVS
EYQQYQDATADLEVEEYETEEKEAELTK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgagagatagtgcacatccagattgggcagtgtggtaaccaaattggggccaagttc
tgggaagtcattggtgaagaacatggaattgatctcaaagggaattacattggagactcg
gatgtccaacttgagaggataaacgtgtatttcaatgaagcacatggtaacaaatatgta
cccagagcaatcttggtggacctggagccaggaacaatggacagtatccgaggcagccat
attggtcacatgttcagaccagacaacttcatttatggtaattcaggtgctggaaacaac
tgggctaaaggtcactacactgagggcgctgagctggtggagaacgtcctggatgtagtg
aggaatgagtgtgagagctgtgactgtttacaaggctttcagatcacccactcgctggga
ggaggaacaggttcaggcatgggcacgctcatcatgaacaaaatccgagaggaatacccc
gacagaattatgaacagcttcagcatcgtcccttcgccaaaggtctcagacacggtggtt
gaaccatacaatgccaccttatccattcaccagctgatcgagaacacagactccaccttc
tgcatcgacaacgaggctttgtacgacatttgctttcgaaccttgaagttggccacacca
acctacggagacctgaaccatctggtttcgatgacaatgagtggtgtcaccacctccctg
cgtttccctggtcaactcaacgcagacctgaggaagctggcggtcaacatggtgccattt
ccccgcctgcatttcttcatgcccggctttgcccctctgacgtcccgtggcagtcagcag
taccgctcgctgacagtgccagagctcacccagcagatgttcgaccccaggaacatgatg
gcggcctgtgaccctcgccatggcaaatacatgacggtggcaacaatcttcagaggcagg
atgtccaccaaagaggtggatgaacagatgttagccatccaggccaagaacagcacctac
ttcgtggagtggattcccaacaacgtcaaggtggctgtgtgcgacattccaccacggggc
ctcaaaatgtcatccaccttcatagggaacaacactgcaatccaggagctcttcaagcgc
atctcagagcagttttcagtcatgttccaaaggaaagcctttctgcactggtacacagga
gagggcatggatgagatggagttcacagaagcagaatgtaataccaatgatttggtatcc
gaataccaacaataccaagacgctactgcagaccttgaagtagaagagtatgaaacggaa
gagaaagaggctgaactgaccaaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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