KEGG   Ruegeria sp. YS9: NOR97_09290
Entry
NOR97_09290       CDS       T10219                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ruy  Ruegeria sp. YS9
Pathway
ruy00010  Glycolysis / Gluconeogenesis
ruy00020  Citrate cycle (TCA cycle)
ruy00260  Glycine, serine and threonine metabolism
ruy00280  Valine, leucine and isoleucine degradation
ruy00310  Lysine degradation
ruy00380  Tryptophan metabolism
ruy00620  Pyruvate metabolism
ruy00630  Glyoxylate and dicarboxylate metabolism
ruy00640  Propanoate metabolism
ruy00670  One carbon pool by folate
ruy00785  Lipoic acid metabolism
ruy01100  Metabolic pathways
ruy01110  Biosynthesis of secondary metabolites
ruy01120  Microbial metabolism in diverse environments
ruy01200  Carbon metabolism
ruy01210  2-Oxocarboxylic acid metabolism
ruy01240  Biosynthesis of cofactors
Module
ruy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ruy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ruy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ruy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ruy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NOR97_09290 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NOR97_09290 (lpdA)
   00620 Pyruvate metabolism
    NOR97_09290 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NOR97_09290 (lpdA)
   00640 Propanoate metabolism
    NOR97_09290 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NOR97_09290 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NOR97_09290 (lpdA)
   00310 Lysine degradation
    NOR97_09290 (lpdA)
   00380 Tryptophan metabolism
    NOR97_09290 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NOR97_09290 (lpdA)
   00670 One carbon pool by folate
    NOR97_09290 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ruy04147]
    NOR97_09290 (lpdA)
Enzymes [BR:ruy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NOR97_09290 (lpdA)
Exosome [BR:ruy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NOR97_09290 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored DAO GIDA HI0933_like NAD_binding_8 FAD_binding_3 Lys_Orn_oxgnase Thi4 2-Hacid_dh_C AlaDh_PNT_C 3HCDH_N
Other DBs
NCBI-ProteinID: UUV04831
Position
1:complement(1828158..1829552)
AA seq 464 aa
MAAQSYDLIVIGAGPGGYVAAIRAAQLGLKTVVVEREHLGGICLNWGCIPTKALLRSSEV
FHLMERAKDFGLKADKIGYDLDAVVKRSRGVAGQLSGGIGHLLKKNKVAVVMGEATIPAK
GKVSVKTDKGTEELTAKNIILATGARARELPGLEADGDLVWTYKHALQPPRMPKKLLVIG
SGAIGIEFASFYNTLGADTTVVEVMDRVLPVEDAEISALAKKAFTKQGMTIMEKAMVKQL
DRGKGKVTAHIEVKGKVEKHEFDTVISAVGIVGNVENLGLEALGVKIDRTHVVTDEYCRT
GVDGLYAIGDIAGAPWLAHKASHEGVMVADLIAGQHAHPVKPESIAGCTYCQPQVASVGY
TEAKAKELGYDIKVGRFPFIGNGKAIALGEPEGLIKTVFDAKTGELLGAHMIGAEVTELI
QGYVVGRQLETTEEDLMNTVFPHPTLSEMMHESVLDAYGRVIHM
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggctgcacaatcctatgatctgatcgtaatcggggctggccccggtggctatgtcgcc
gccatccgtgcggcccagcttggtctgaaaaccgtcgtggtcgagcgcgagcaccttggt
ggcatctgcctgaactgggggtgcattcccaccaaggcattgctgcggtcctccgaagtg
tttcacctgatggaacgcgccaaggatttcggattgaaggccgacaagatcggttacgat
ctggacgcggtcgtcaagagatcccgtggcgttgccgggcagctttcgggcggcatcggc
catctgctgaagaagaacaaggtcgccgtggtgatgggtgaggcgacgatccccgcaaaa
ggcaaagtcagcgtcaagaccgacaagggcaccgaagaactgacggccaagaacatcatt
ctagcaaccggcgcgcgggcccgcgaactgcccggtctcgaggctgacggcgatctggtc
tggacctacaagcacgcgctgcaaccgccccggatgcccaaaaagttgctggtcatcggc
tcgggcgcgatcggcatcgagtttgcgagtttctacaacacgctcggggccgatacgacg
gtggtcgaggtgatggaccgcgtgttgcccgtggaagatgcggaaatcagtgccctggcc
aagaaagcctttaccaagcaaggcatgaccatcatggaaaaagccatggtcaagcaactg
gatcgtggaaagggcaaggtgaccgcgcatatcgaggtcaagggcaaggttgagaagcac
gagttcgacaccgtgatttccgctgtcgggatcgtaggaaatgtcgaaaacctgggcctg
gaggcgctgggcgtaaagatcgaccgcacgcatgtggtgacggatgaatattgccgcacc
ggtgtcgatggcctttatgcgattggtgacatcgcgggcgcgccctggcttgcacataaa
gccagccacgaaggggtcatggtcgccgatctgatcgcaggccagcatgcgcatccggtc
aagcccgaaagcatcgccggatgtacctattgtcagccgcaggtggcctcggtgggatat
accgaagccaaggccaaagagctgggttatgacatcaaagtcggtcgcttccctttcatc
ggcaacggcaaggccatagctctgggcgaaccggaaggtctgatcaaaaccgtgttcgac
gccaagacaggcgaactgctgggggcgcatatgatcggcgcggaagtcacggaactgatc
cagggctatgtggttgggcggcagctggagaccaccgaagaagatctgatgaacacggtc
ttcccgcacccgactctgtcagaaatgatgcacgaaagcgtgttggatgcgtatggccgc
gtgatccacatgtaa

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