KEGG   Rhododendron vialii: 131322402
Entry
131322402         CDS       T09330                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rvl  Rhododendron vialii
Pathway
rvl00900  Terpenoid backbone biosynthesis
rvl01100  Metabolic pathways
rvl01110  Biosynthesis of secondary metabolites
Module
rvl_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    131322402
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rvl01006]
    131322402
Enzymes [BR:rvl01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     131322402
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     131322402
    2.5.1.29  geranylgeranyl diphosphate synthase
     131322402
Prenyltransferases [BR:rvl01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   131322402
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 131322402
NCBI-ProteinID: XP_058209703
Position
4a:2003311..2004514
AA seq 307 aa
MARALSHFNGKPILSLSKPNPYHPSPPPSSSSSVHKPTTVAMAQTKSYWASIEADIEAHL
KTAIPVRQPVAVFEPMRHLVFAAPKAKAPALCVAACELVGGDRAQAVVAASALRLVHSAA
HAHEHLPLMDRPNHKPGIHHAYGPNIELLTGDGIVPFGFELLARSVGSVQNNSDRVLRVI
IEITRAIGSQGMIDGQYHESQQGARSNEEWIEHVCMKKEGELHACGAACGAILGGGSEEE
IEKLRKFGLYVGMIEGMLNWVVGHEEEGLMDVVERLRVMAIKELENLSGRNVEPISSLVE
VASLCNL
NT seq 924 nt   +upstreamnt  +downstreamnt
atggcaagagctctctctcacttcaatggcaaaccaattctttctctctctaaaccaaat
ccttaccatccatcaccaccaccatcatcatcatcatcggttcacaagcccacgacggtc
gccatggcccaaaccaaatcttactgggcctccatagaagccgacatcgaggcccatctc
aagacggccatcccagtccggcaacctgtcgcggtcttcgagcccatgcgccacctggtc
ttcgccgcgccgaaagccaaggcgccggctttgtgcgtggcggcgtgcgagctcgtcggc
ggcgaccgggctcaggccgtggtcgccgcctccgctttgcgcctcgtgcattcggcggcc
cacgcccacgagcaccttccgttgatggacaggcccaatcacaagcccgggatccatcac
gcttacggcccaaatatcgagctcctcaccggtgatgggattgtgccatttgggtttgag
ttactggcccgatccgtcgggtcggttcagaacaactcggatcgggttttacgggtgatt
attgagattacacgtgccataggttcgcaggggatgatcgacggccaatatcacgagtca
caacaaggcgctcgatccaacgaggagtggatcgaacatgtgtgcatgaagaaagaaggt
gagttgcacgcgtgcggggccgcgtgtggggccatattgggagggggaagtgaggaggag
atagaaaagttgagaaaatttggactttatgtgggaatgatagaggggatgttgaattgg
gtggtaggacatgaggaggagggattgatggatgtagtggagagattgagagtgatggct
atcaaggaattggagaatttaagtggtaggaatgttgagccaatttctagccttgttgag
gttgctagcctttgcaatctatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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