KEGG   Silicimonas algicola: EF888_04950
Entry
EF888_04950       CDS       T05779                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
salo  Silicimonas algicola
Pathway
salo00521  Streptomycin biosynthesis
salo00523  Polyketide sugar unit biosynthesis
salo00525  Acarbose and validamycin biosynthesis
salo00541  Biosynthesis of various nucleotide sugars
salo01100  Metabolic pathways
salo01110  Biosynthesis of secondary metabolites
salo01250  Biosynthesis of nucleotide sugars
Module
salo_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:salo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    EF888_04950 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    EF888_04950 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    EF888_04950 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    EF888_04950 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    EF888_04950 (rfbB)
Enzymes [BR:salo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     EF888_04950 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short NmrA
Other DBs
NCBI-ProteinID: AZQ66544
UniProt: A0A316GF91
Position
complement(977841..978875)
AA seq 344 aa
MKILVTGGAGFIGSAVVRQGIRRGHEIVNLDALTYAANLANVAPVSNAPGYAFEKVSITD
RAGLDDVLARHRPDAVMHLAAESHVDRSIDGPAAFIETNVTGTYTLLEAARSYWTAEGKP
ESFRFHHISTDEVFGSLGPTGKFTEDTPYDPRSPYSASKASSDHLVRAWHETYGLPVVLT
NCSNNYGPYHFPEKLIPVVILNALHGRAIPVYGAGENVRDWLYVEDHADALLLVLEQGVV
GRSYNIGGENEARNIDLVRTICRLLDERRPHAAPHDRLVEFVTDRPGHDLRYAIDPSRIR
EELGWRPSVTLEEGLAKTVDWYLANEEWWRPLLTVAMERRGKAS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaagatcctcgttaccggaggcgcgggcttcatcgggtccgccgtcgtgcgccagggc
attcgtcgcggccacgagatcgtcaacctcgacgcgctgacctatgccgcgaaccttgcc
aacgtggcgccggtgtcgaacgcgcccggatatgccttcgagaaggtgtcgatcaccgat
cgcgcaggcctcgacgacgtcctcgcgcgccaccgtcccgatgcggtgatgcacctcgcc
gcggagagccatgtcgaccgctccatcgacggacccgcggcgttcatcgagaccaacgtg
accggcacctacacacttctggaagcggccagaagctattggactgcagagggaaaaccg
gagtcgttccgctttcatcacatctcgaccgacgaggttttcggctcgctcggaccgaca
ggcaagttcaccgaggacacgccctacgacccgcgctcgccctattcggcgtcgaaggca
tcgtcggaccatctggtccgcgcctggcacgagacttatggcctgccggtcgtcctgacc
aactgctcgaacaactacgggccctaccacttccccgagaagctgatcccggtggtcatc
ctgaatgcgctgcatgggcgcgcgatcccggtctatggcgcgggcgagaacgtgcgcgac
tggctttatgtcgaagatcacgctgatgcgctgcttcttgttctggaacaaggcgttgtc
gggcgaagctacaacatcgggggtgaaaatgaggcgcgcaacatcgaccttgtccgcacc
atctgccgccttctcgacgagcgccgtccgcatgcggcgccgcacgatcgcctcgtcgag
ttcgtcaccgaccgtcccggccatgacctgcgctatgcaatcgatccgtcgcgcatccgc
gaagaactgggctggcggccgtccgtcacgctggaggaagggcttgccaagaccgtcgac
tggtatctcgccaacgaggagtggtggcgtccccttctgaccgtcgcgatggagcgtcgg
gggaaggcgtcgtga

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