KEGG   Silicimonas algicola: EF888_16365
Entry
EF888_16365       CDS       T05779                                 
Name
(GenBank) RNA degradosome polyphosphate kinase
  KO
K00937  polyphosphate kinase [EC:2.7.4.1]
Organism
salo  Silicimonas algicola
Pathway
salo00190  Oxidative phosphorylation
salo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:salo00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    EF888_16365
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EF888_16365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salo03019]
    EF888_16365
Enzymes [BR:salo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.1  ATP-polyphosphate phosphotransferase
     EF888_16365
Messenger RNA biogenesis [BR:salo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     EF888_16365
SSDB
Motif
Pfam: PP_kinase_C_1 PP_kinase PP_kinase_C PP_kinase_N PLDc_2
Other DBs
NCBI-ProteinID: AZQ68568
Position
3340589..3342769
AA seq 726 aa
MTVTPTDFLRAPLPPAVMPEGKDFDGPDRFMNRELSWLAFNWRVLEEAENPRVPVLERLR
FLSISATNLDEFYTVRVAGLRELAHAGNTTPAADGLSPIEQLVLINADARRLLERQQEVW
KALRDEMASANISLLSRDDLTREDRSHVEQVFLTQVFPILSPLAIDPAHPFPFIANEGYS
LALELERVSDKRPLRALLPIPAQVDRFVPLPSEPGEHRFLPLEELLLLHLQRLFPGYGMK
GHCQFRVLRDSDLEVEEEAEDLVREFEVALKRRRRGEVVRLTISANAPGKLRRVIMDELH
VEDSEVVELDGMLGLSDLKELVLDSRTDLLWTPFLPRVPERVQDHDGDMFAAIRQKDMLL
HHPYETFDMVIRFLKQAAADPNVVAIKQTLYRTSRNSPIVEALCEAAEDGKSVTALVELK
ARFDEAANIRQSRRLERAGAHVVYGFMNYKTHAKISTVVRREGGELVTYTHFGTGNYHPI
TARIYTDLSLFTCDSALGRDATKVFNYLSGYAQPEGLENLSISPLNLKTTLLERIAEEAE
FALAGKPAVIWGKLNSIIEPDVIDALYLASQAGVRIDLVVRGICGLRPGVKGLSDNIRVK
SIVGRFLEHSRIVCFGAGHGLPHKKARVYISSADWMGRNLARRVETLVECKNPTVKAQIV
SQIMAANLADVAQSWMLGPDGTYARIAPPEGETAFSCHRFFMENPSLSGRGSAGAADVPE
LTHSED
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaccgtcacgccgaccgatttcctgcgcgcgcccctgcctccggccgtgatgcccgag
ggtaaggacttcgacggtccggaccgtttcatgaaccgtgaactgtcgtggctggccttc
aactggcgggtgctggaggaggccgagaacccccgtgtccccgttctcgagcgtctgagg
ttcctgtcgatttcggccacgaacctcgacgagttctacaccgtgcgcgtcgccggcctg
cgcgagctggcccatgccggaaacaccacgcccgccgcagacgggctttccccgatcgag
cagctggtcctcatcaacgcggacgcgcgccgcctcctggaacgccagcaggaggtgtgg
aaggccctgcgcgacgagatggccagcgcaaacatctcgcttctctcccgcgacgacctc
acgcgcgaagaccgctcccatgtcgagcaggttttcctgacgcaggtcttcccgatcctg
tcgcctctggccatcgacccggcgcacccgttcccgttcatcgcgaacgaaggttattcg
ctagcgctggaactcgagcgtgtttcggacaagcgtccgctccgcgcgcttcttccgatc
cccgcgcaggtcgaccgcttcgtgcccctgccgtccgagccgggagagcatcgcttcctg
cccctcgaagagctgttgcttcttcacctgcaacgcctgtttccaggctacggcatgaag
gggcattgccagttccgcgtcctccgcgacagcgacctcgaggtcgaggaagaggccgaa
gacctcgttcgcgagttcgaagtcgccctgaagcgccgccgccgcggcgaagtggtgcgc
ctgacgatctcggccaatgcgccaggcaagctgaggcgcgtcatcatggacgagcttcac
gtcgaagacagcgaagttgtcgagctcgacgggatgctgggcctcagcgacctgaaggaa
ctcgtgctggactcgcgcacggacctgctctggacgccattcctgccgcgtgtgcccgag
cgggttcaggaccacgacggcgacatgttcgcggcgatccgccagaaggacatgctgctg
caccacccctacgagaccttcgacatggtgatccgcttcctcaagcaggcggcggccgac
ccgaacgtggtggcgatcaagcagacgctttaccggacgtcgcgcaactctcccattgtc
gaggcgctgtgcgaagcagcggaagacggcaagtcggtcaccgcgcttgtcgaactgaag
gcccgtttcgacgaggctgcgaacatccgccagtcgcgacggctggagcgcgcgggcgcc
cacgtcgtctacggcttcatgaactacaagacacacgccaagatctcgaccgtcgtccgg
cgcgaaggcggcgagcttgtcacctatacccatttcgggaccggcaactatcacccgatc
accgcacgcatctacaccgacctgagcctcttcacctgcgattccgccctcggccgcgat
gccacaaaggtgttcaactacttgtcgggctacgcccagcccgaggggttggagaacctg
tcgatctcgcccctgaacctcaagaccacgcttctcgagcgtatcgctgaggaagccgaa
ttcgcgctggccgggaagcccgccgtgatctggggcaagctcaactcgatcatcgagccg
gacgtgatcgatgcgctctacctcgcaagccaggccggcgtcaggatcgacctcgtggtc
cgcggaatctgcggcctgagacccggcgtgaagggtctgtcggacaacatccgcgtcaaa
tccatcgtgggccgcttcctcgaacacagccgcatcgtctgcttcggcgcgggccacggt
ctgccgcacaagaaagcgagggtctacatctcgtccgccgactggatgggccgcaacctc
gctcgccgggtcgagacgctcgtcgagtgcaagaaccccacggtgaaagcccagatcgtc
agccagatcatggccgcgaacctcgccgacgtggcacagagctggatgctcggaccggac
ggaacctacgcccgcatcgcgccgcccgagggcgagacggccttctcgtgccatcgcttc
ttcatggaaaacccgtccctgtcgggacgaggatcggcgggcgcggcggacgtgccggag
ctgacccacagcgaggattga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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