KEGG T05762: 111950543

Salvelinus sp. IW2-2015 (Arctic char): 111950543

Entry

111950543         CDS       T05762

Name

(RefSeq) alpha-actinin-3

K21073

actinin alpha 2/3

Organism

salp Salvelinus sp. IW2-2015 (Arctic char)

Pathway

salp04820

Cytoskeleton in muscle cells

Brite

KEGG Orthology (KO) [BR:salp00001]
09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111950543
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111950543
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:salp04812]
    111950543
   04147 Exosome [BR:salp04147]
    111950543
Membrane trafficking [BR:salp04131]
Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    111950543
Cytoskeleton proteins [BR:salp04812]
Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     111950543
Exosome [BR:salp04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111950543
  Exosomal proteins of colorectal cancer cells
   111950543
  Exosomal proteins of bladder cancer cells
   111950543

SSDB

Motif

Pfam:

Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 CAMSAP_CH AIF-1 PRP9_N FAZ1_C XisI

Other DBs

NCBI-GeneID:

111950543

NCBI-ProteinID:

XP_023823949

Position

LG23:complement(41418347..41439933)

AA seq 895 aa
MTAIETQVQYGSYMTSEQIYMTQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQI
ENIEEDFRNGLKLMLLLEVISGERLPKPDKGKMRFHKIANVNKALDFICSKGVKLVSIGA
EEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQNFHIS
WKDGLALCALIHRHRPDLIDYSKLRKDDPMGNLNTAFEVAEKYLDIPKMLDAEDIVNTPK
PDEKAIMTYVSCFYHAFAGAEQAETAANRICKVLAVNQENEKLMEEYETLASELLEWIRR
TIPWLENRVAEQTMRAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPA
FMPSEGKMVSDIANAWKGLEQVEKGYEEWLLTEIRRLERLDHLAEKFKQKCSLHESWTSG
KVELLSMKDYESASLMEIRALMRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVTI
NARCQGICDQWDNLGTLTQKRRDSLERVEKLWETIDQLYLEFAKRAAPFNNWMDGAMEDL
QDMFIVHSIEEIQSLITAHDQFKATLPEADKERVATMGIQNEIVKIAQTYGIKLSGVNPY
TNLSPQDITDKWDAVKHLVPLRDQMLQEEVARQQSNERLRRQFAAQANIIGPWIQTKMEE
ISHVSVDIAGSLEEQMSNLKQYEQNIINYKCNIDKLEGDHQLSQESLIFDNKHTNYTMEH
VRVGWEQLLTTIARTINEVENQILTRDAKGISQEQLNEFRASFNHFDRKRNGMMDPDDFR
ACLISMGYDLGEVEFARIMTLVDSNNTGVVTFQAFIDFMTRETAETDTADQVMASFKILA
SDKTYITVEELRRELPPEQADYCISRMTSYIGSGAPPGALDYISFSSALYGESDL

NT seq 2688 nt +upstreamnt +downstreamnt
atgacagcaatcgaaactcaggtgcaatatggctcctacatgacttcggagcaaatctac
atgacccaagaggatgattgggacagggaccttctgttggatcctgcctgggagaaacag
caacgcaagaccttcaccgcctggtgcaactctcacctgcgtaaagcgggcacacagatt
gagaacattgaggaggacttcaggaatgggctcaaactcatgttgctgttggaggtcatc
tcaggtgaaaggcttcccaagccagacaaaggcaaaatgcgtttccacaaaatcgccaac
gtgaacaaggccctggatttcatctgcagcaagggagtcaagctggtgtccatcggtgcc
gaggagattgtggatggtaatgtgaagatgaccctggggatgatctggaccatcattctg
cgtttcgccatccaggacatctctgtagaggagacctctgctaaggagggtctgttgctg
tggtgccagaggaagactgccccctacaggaatgtcaatgtgcagaacttccacatcagt
tggaaggatggyctggcactgtgtgccctcatccacagacacagacctgacctcattgac
tactccaaactgcgcaaggatgaccccatgggcaatctcaacactgccttcgaggtggca
gagaagtacctggacatccccaagatgttggatgcagaagatattgtgaacaccccaaag
cccgacgagaaggccatcatgacctatgtgtcctgcttctatcatgccttcgctggagcc
gagcaggctgagacggctgccaacaggatctgcaaggtgctggctgtcaaccaggagaac
gagaagctcatggaggagtatgagacgctggccagtgagctgctggagtggatccgtcgc
accatcccctggctggagaaccgtgtggccgagcagaccatgcgcgccatgcagcagaag
ctggaggacttccgtgactaccgtcgcgtccacaagcctcccaaggtgcaggagaagtgt
cagctggagattaacttcaacaccctgcagaccaagctgaggctgagcaacaggcccgcc
ttcatgccctccgagggcaagatggtgtcggacattgccaatgcctggaagggtctggag
caggtagagaagggctatgaggagtggctgctcactgagatccgccgcctggagaggctg
gaccacctggctgagaagttcaagcagaagtgttccctgcatgagtcctggacctcaggt
aaggtggagctgctgtccatgaaggactatgagtctgcctcactgatggagatccgtgcc
ctgatgaggaagcacgaggcgtttgagagcgacctggccgcccaccaggacagagtggag
cagattgctgccatcgcccaggagctcaatgagctggactatcatgacgccgtcaccatc
aacgcccgctgccagggtatttgtgaccagtgggacaacctgggcaccttgacccagaag
aggagagactcactggagcgtgtggagaagctgtgggagaccatcgaccagctgtacctg
gagttcgccaagagagcagcccccttcaacaactggatggacggagccatggaggactta
caggacatgttcattgtgcacagtattgaggagatccagagtctgatcacagcccatgac
cagttcaaggccaccctgccagaggctgataaggagcgcgttgcaaccatgggaatccag
aatgagatcgtgaagatcgctcagacctacggcatcaagctgtcaggagtcaacccctac
accaacctttcyccccaggacatcaccgacaaatgggatgctgtgaaacacctggtgccc
ctcagggatcagatgctgcaggaggaggtggccaggcagcagtccaacgagaggctgagg
cgccagttcgctgcccaggccaacatcatcggaccctggatccagaccaagatggaggag
atcagccacgtgtctgtggacatcgccggctccctggaggaacagatgagcaacctgaag
cagtacgagcagaacatcatcaactacaagtgcaacatcgacaagctggagggagaccac
cagctcagccaggagtccctcatctttgacaacaagcacaccaactacaccatggagcat
gtgcgtgtgggctgggagcagctcctgaccaccatcgcccgcaccatcaacgaggtggag
aaccagatcctgacccgagatgccaagggcatcagccaggagcagctcaacgagttcaga
gcctccttcaaccactttgacaggaagagaaatggtatgatggacccagacgacttccgy
gcctgtctcatctccatgggctacgatctgggtgaggtggagtttgcccgcatcatgacg
ctggtggattccaacaacacaggtgtggtgaccttccaggccttcatcgacttcatgacm
cgcgagacggccgagacggacaccgccgatcaggtcatggcctcattcaagatcctggcc
tccgacaagacatacatcacagtggaagaactgcgcagggagctgcccccagagcaggcc
gactactgcatcagccgcatgaccagttacatcggcagtggcgcacccccaggcgccctg
gactacatctccttctccagtgccctgtacggagagagcgacttataa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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