KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111959574
Entry
111959574         CDS       T05762                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111959574
Spliceosome [BR:salp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    111959574
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    111959574
SSDB
Motif
Pfam: MA3 MIF4G DUF7026
Other DBs
NCBI-GeneID: 111959574
NCBI-ProteinID: XP_023836993
Position
LG36:29416168..29486002
AA seq 1073 aa
MATETIDNDLAVELSPNSREEPPKTSGMDQPRRSRSRSGSRSLSEEGGRENNVAQQKSNV
EAPEGADSPAAGPRDEGPREASPGSEAPIVLGSPGVASSKATRGSRVPSNASVSQEGESS
GSDNKSSDEDSDEGVARRMKSSVAQIVHGPDDQSVNKGRSPTPDDRDDDRRRSRSRSRSR
SQERDRRYGRVGYSRSRDDDRDRYYDRYERRSSRDREAEFRRRGRSPSPAQKDPAAEEPP
VKKKKDELDPILTRTGGAYIPPAKLRMMQAQITDKSSLAYQRMSWEALKKSINGLINKVN
VSNIAMIIQELLQENIVRGRGLLARSTLQAQSASATFTHVYAAVVAIINSKFPQIGELIL
KRLILNFRKGYRRNDKAQCLTASKFVAHLVNQNVAHEVLCLEMLTLLLERPTDDSVEVSI
SFLKECGLKLTEVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIVP
EGLDLVEEDDQFTHMLPLEDDYNQEDILNVFKMDPDFLENEEKYKAIKKEILDEGSSDSG
EDVDGSDDDEDDGEKEGEEGGDEAEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEECAHK
LIKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKDYMESFEAIFMEQYET
IHRLETNKLRNVARMFAHLLYTDSVPWSVLECIKVSEDTTTSSSRIFVKILFQELCAYMG
LPRLNERLKDMTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIM
TQNQDVESSDSDSSSSSSDSSSSDSDSSDSDSSDSSTDSDSSSNSSDSDSRRKKSKGQSK
KKKSDKDKKKDKKTKDKASSKKKSPLEERPNRSLRHENRRRDDSSSDEEEAERGGGRPGP
EDRHKASRHRDRVEDAPPPTHERPDRADRGGHKDKELPRGRPGRDRDYEDGDRQPEARRH
NKDDGEGNDGKHQAPQADRDRVRHRSPEKEKEPVSSGGRDREKERSKSRERSSRKEKDMD
SSRDSNRNGVERQAERAERADKENRENRHHSDRYREPRRNEERSRNSSPRRRR
NT seq 3222 nt   +upstreamnt  +downstreamnt
atggctacagagacaatcgacaacgatttagcagtggagctaagccctaattctagagaa
gagcctcccaagaccagtggcatggatcagccccggaggagcaggagtaggagtggcagc
aggagtctgtccgaggaaggagggagagagaacaatgtggcacagcagaagagcaatgtg
gaagcaccagagggggcagatagtcctgcagccggtcccagagacgaaggccccagagag
gccagccctggatcggaggcccccatagttctaggcagtcccggagtagccagctccaaa
gccaccaggggcagtagggtcccttccaatgccagtgtcagccaggagggggagtctagt
ggctctgacaataagagcagtgatgaagacagtgatgagggagtggcccgcaggatgaag
agcagtgtggcacagatcgtgcatggtccagatgaccagagtgtaaacaaaggcaggagc
cccaccccagatgacagggatgatgatcgccgtaggtcccgctccaggtcccgttccaga
agtcaggagagggataggcgctatggtagagtaggttacagcaggtcaagggacgatgat
cgagacagatattacgaccgttatgagcgccggtcgagtcgggacagagaggctgagttc
aggaggagaggccgatcgccctccccagcccagaaggaccctgctgcagaggaaccacca
gtgaagaagaagaaggatgaactggaccctatcctgacccgaactggtggagcctacatc
cccccggccaagctacgtatgatgcaggctcagatcactgacaagagcagtctggcttac
cagcgtatgagctgggaggctctgaagaagtccatcaatggtctgataaacaaggtgaac
gtatccaacatcgccatgatcatccaggaactgctgcaggagaacatcgtcaggggcaga
ggtctcctggccaggtccaccctacaggcccagagtgcctcggccaccttcacccacgtc
tatgctgctgtggtagccatcatcaactccaagtttcctcagataggagagctcatcctc
aagagactcatccttaacttccgcaagggctaccggaggaacgacaaggcacaatgtctc
acggcatcaaagttcgttgcccacctggtcaatcagaatgtggcccatgaggtgctgtgt
ctggagatgttgactctgctcctggagagacctacagatgacagcgtggaggtgtccatc
agcttcctcaaggagtgtggcctcaaactcactgaagtctcccctagaggcatcaatgcc
atcttcgagcggctgcgtaacatccttcacgagtcggagatagacaagcgtgtgcagtac
atgatcgaggtgatgttcgccattaggaaggacgggtttaaggaccaccctattgtcccc
gaggggctggacctagtggaggaggacgatcagttcacacacatgctgcccctagaggat
gactacaaccaggaagatatactgaatgtctttaagatggatccagacttcttggagaac
gaggagaagtacaaagcaattaagaaggagatcctggatgagggcagcagtgactctgga
gaagacgtggatggaagtgacgatgatgaagatgatggagaaaaagagggggaagagggc
ggagatgaagcagagaaagtcaccatcttcgaccagacggaagtcaacctggtcgcattt
cgccgcaccatctatctcgccatccagtcaagtttggattttgaggagtgtgcccacaag
ttgatcaagatggactttcctgacagccaaacaaaagagctgtgcaacatgattctagac
tgctgtgcccaacagaggacctacgagaagttctttggtcttctagcagggaggttttgt
ctgctgaagaaggactatatggagagttttgaggccatcttcatggagcagtatgaaacc
atccatcgcctagaaaccaataaactgagaaacgttgccaggatgtttgctcatctcctg
tacactgactctgtcccgtggagtgtgctggaatgtattaaagtcagtgaggacaccacc
acgtcgtccagtcgaatcttcgtcaagatcttgttccaggagctctgtgcctacatgggt
ctgcccaggctcaatgaacgactcaaggatatgacgttgcagcccttcttcgagggtctc
ttccctcgtgacaaccccaggaacacccgattcgccataaatttcttcacctccattggc
ctgggtggacttacggatgagctccgtgagcatctgaagaacgcccccaagataatcatg
acccagaaccaggacgtggagtcgtcagactccgactcgtcctcttcctcctctgactcg
tcctcctcagacagtgacagcagcgacagtgacagctctgactcttccactgactctgac
tcgtccagcaacagctcagattccgattcgaggcgtaaaaagagcaaaggccagagcaaa
aagaagaagagcgacaaagacaagaagaaagacaagaagaccaaggacaaggcttcttcc
aaaaagaagtcacctctggaggaacggcccaataggagtctgagacacgaaaaccgtcgc
cgtgatgacagcagtagcgatgaagaggaggcggagcgcggcggggggagacccgggcct
gaggaccgccacaaagcctctcgccaccgggatcgagtagaagatgctccgccacccaca
catgagagacccgaccgtgctgaccgtggagggcacaaagacaaggagctgcctcgtggc
aggcctggcagagaccgagactatgaggacggggacagacagccagaggcccgcaggcac
aacaaggacgatggagagggaaacgatgggaaacaccaagccccccaggccgaccgtgac
cgagtcagacaccgtagccctgagaaagagaaggaaccagtgagcagtggaggcagggac
agagaaaaagagaggtcaaagtcacgggagaggagcagccgcaaggagaaggacatggat
tcctccagggactcgaacaggaacggggtggagcggcaggcggagagggcagagcgggcg
gacaaggagaacagggagaaccgccatcactctgacagatacagagaacccaggcgaaac
gaggaacggagcaggaatagctccccgcgcagacggagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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