KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111968954
Entry
111968954         CDS       T05762                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04217  Necroptosis
salp04622  RIG-I-like receptor signaling pathway
salp04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    111968954
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    111968954
   04625 C-type lectin receptor signaling pathway
    111968954
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:salp01002]
    111968954
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111968954
Enzymes [BR:salp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111968954
Peptidases and inhibitors [BR:salp01002]
 Cysteine peptidases
  Family C67
   111968954
Ubiquitin system [BR:salp04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    111968954
SSDB
Motif
Pfam: CAP_GLY UCH DZR_2
Other DBs
NCBI-GeneID: 111968954
NCBI-ProteinID: XP_023850710
Position
LG1:48593174..48601428
AA seq 707 aa
MESKREGKDKFFIVTRGKARKGFARGCIGRVEAEMQKGELMGLLYGGGSSGGNPKSGGMV
KMEDTYPLTCHQAQLLLFVSPSSKRLELLCNPQLFLAICVLSQDDLVVVKHKKGHQPGLV
RNLMLIGKKENQGDLLMLGFEVEFVQDSNQTVSSKKPAPLPLFSAADIVQVVPAYSVGLG
PRWKDSHSEGLNRKAVSRINSMPNMGSRGRQVRDINHVDQSVTPPESLSYHTFDVGSLVE
VTSNTGIIVYGVIQWMGVLSENKNDWVGIELDYEVNNCSDGTYGGQRYFTCKGGRALFVP
LTKCSPDGRFLCPRSEKETFKATNILPVTPLEETDENVPPIPESEALSLLVGKMKGIQGH
YNSCYLDATLFSLFSSSMTLDSVCHKPADTEQSISRSLRKDIVNCLRRQGFVPAESVMNF
RKQLGCDTFVTEEKDPEEFITILLQRVLCMEPLLKLRSNNDTSQDAYTFQIILDKEQVTQ
TPTVQQLLDTSFLSCGLKFEEIPSCLMVQMPRFGKKYKMFPHIIPSTELDITDLLYNSPR
ECFLCGRLAEYECPQCLQDRKLQPGRVKQYCTTCKTQVHTHPSRKGHCPRALAVPAEVPA
DAPLPRHMMQLFAVLCIHTSHYVSFVKYGPGPRSWLFFDSMADRCGDDHSGYNIPEIRAC
PEVGDFLSQSEEELVWADPSQAGEPVRRLLCDSYMCLYQSASMALYR
NT seq 2124 nt   +upstreamnt  +downstreamnt
atggaatcaaaaagagaagggaaggacaagttctttatagtgacacgggggaaggcgaga
aaaggcttcgcaagaggatgtatcggccgtgtggaggcagagatgcagaagggagagctg
atgggactgttgtacggaggtggcagcagtgggggtaaccctaagagtgggggcatggtg
aagatggaggacacatatcccctcacctgccaccaggcccagctgctgctctttgtgtcc
ccctccagcaaacgcctggagctcctgtgtaacccccagctttttttggctatctgtgtg
ctgtctcaggatgacctggtggtggtgaagcacaagaagggtcaccaaccagggctggtt
aggaacctaatgctgatcggtaagaaggagaaccaaggggacctgctgatgctgggcttt
gaggttgagtttgtgcaagactctaatcaaacagtgtcatctaagaagcccgcccctctt
cccctgttcagtgcagcagacattgtccaggttgtcccagcgtactctgtaggccttggc
cctcgctggaaagacagtcattcagagggtctaaacagaaaggcggtgtcacgtatcaac
tccatgcctaatatgggatctcgtggacgacaagtgagagatataaaccacgtagaccag
agtgtcaccccacccgaaagcctgtcataccacacttttgatgtgggatccctggtggag
gtaacgtccaacactgggatcattgtatatggggtaatccagtggatgggcgtcctttca
gaaaataaaaacgactgggttggaattgagctggattatgaggtgaataattgctcagac
gggacytatggaggccagcggtatttcacttgtaaagggggcagggccttatttgtgccc
ctaacaaagtgcagtccagatggaaggttcctatgtcctcgctctgaaaaggagaccttc
aaagccacaaatatcctcccagtcactccattggaggaaaccgatgagaatgttcctcct
atccctgagtcggaagccttgtctttgctcgtgggcaagatgaaggggatccaggggcac
tacaactcctgctacctcgatgccactctcttcagtctgttcagctcatccatgaccctg
gacagtgtttgccacaaaccagctgacacagaacagagcatatctcgctctctgaggaaa
gacatcgttaactgtttgcgccgacaaggttttgtgcctgctgagagtgtaatgaacttc
cgcaagcaactcggctgtgacacctttgtaacagaagagaaagaccctgaagagttcatc
acaatccttctacagcgggtgctgtgcatggagccattgcttaaactcagatcgaataac
gacacatctcaggatgcctacacattccagattattctggataaggagcaggtgacacag
actcccacggttcagcagctgctggatacctccttcctgtcttgtggcctcaagtttgag
gagatcccatcctgtctcatggtccagatgccaaggtttgggaaaaagtacaagatgttc
ccccacatcatcccctcaacagagcttgacatcacagatcttctgtacaactccccccga
gagtgcttcctctgtgggcgtttggcagagtatgagtgcccccagtgcctacaggaccgc
aagctccagccaggaagagtcaaacagtactgcactacttgcaagacacaggtgcacact
catccatctcggaagggccactgccctagagccctggcagtgccagcggaggttccggca
gatgcccctttacccaggcacatgatgcagttgttcgctgtgctctgcatccacaccagc
cactatgtgtcttttgtgaagtatgggcctggccctcgctcctggctcttcttcgacagc
atggcagacagatgtggtgatgaccacagtggctacaacattccagagatcagggcttgt
cccgaggtgggtgacttcctgtctcagtcagaggaggagctagtgtgggctgacccctcc
caggctggagagcctgtccgcaggctgctgtgtgactcctacatgtgtttgtaccagagc
gcatccatggcactctacagataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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