KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111973555
Entry
111973555         CDS       T05762                                 
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor VAV3-like
  KO
K05730  guanine nucleotide exchange factor VAV
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510  Focal adhesion
salp04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111973555
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    111973555
SSDB
Motif
Pfam: RhoGEF CAMSAP_CH SH3_2 SH3_1 CH SH3_9 SOS1_NGEF_PH PH C1_1 RHG20_PH CDC24 SH2 SRA1 Prok-RING_1 PH_10 C1_2 zf-RING_16 zf-RING-like
Other DBs
NCBI-GeneID: 111973555
NCBI-ProteinID: XP_023856704
Position
LG14:36456801..36595701
AA seq 857 aa
MMEYWRQCALWLINCKVLPPNHRVTWESAQVFDLAQTLRDGVLLCQLLNNLRPHSINLKE
INLRPQMSQFLCLKNIRTFLSACYEIFGMKKSELFEAFDLFDVRDFGKVMDTLSKLSRTT
ISEQTGIKAFPSEESLEEDEDIYNHLEDLIDEKGVEDEEDLYDCVYDDEDGGEIYEDLMK
AEAVPPPLCXRQNIRSCCLTEIKQTEEKYTETLDSIEKYFMAPLTTFLSSEEMKNVFVNI
PDLVKVHKSLMVEIQDSVHHKSAQNIYQIFINYKERLLIYGKYCSHVETAIVALDDICKH
REDIRMKLEECAKRANYGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDAADKSNLRLAL
DAMKDLAQYVNEVKRDNETLRDIAQYQKSIENLNQSLSTYGRPKGDGEVRVTSIDKRAKQ
DRHIFLFDAAVIVCKRRGDNYEMKEVIDLHHFKITNNPTSDKENRKWSYGFYLTHNQGQS
GFELFFKTKELKKKWLEQFGMAISNIRPENGTSNLHEFKMHTFDRITSCSYCHMLLRGIF
NQGYLCSKCGVGAHKECLGRFGSCGKTDSGSFRTQVKSVQGRRSDPGLPKMLVTRNYFGV
PSPICGPPLNIQQGDIIELVCADLHSSWWQGKILTTREVGFFPSDAVKPCPCVPKPCRLL
HTPCASWTVGLLAHERLQLRAELINRGNSTTGPPPTASSQSTPSASKAEHYTHLLFMAHR
YNNDVKHIKILTRDACFHIAENKKFRSILELIEYYKHHSLREGFRSLDTTLQFPYREQEN
AAMLHTNRPGGNMFTPKVMGMAIARYDFSSRDTRELSLQEGDIVKIYTKSGANGWWRGEV
SGRVGWFPSTYVEEGEE
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgatggagtattggaggcagtgcgcattatggctgatcaactgcaaggtgcttccaccc
aaccatcgggtaacatgggagtccgcccaggtattcgacctggctcagacactccgagat
ggagtgctcctgtgtcagcttctcaacaacctccgaccccattccatcaacctcaaagag
atcaatctcagaccgcagatgtcacagttcctgtgcttgaagaacatcaggacatttctc
tccgcctgctatgagatatttggcatgaagaagagtgaactctttgaggccttcgacttg
tttgatgtgcgggactttggaaaggttatggacacattgtccaaactgtcccgcaccacg
atttcagaacaaaccggaataaaggcttttccttcagaggagagtctagaagaagatgag
gacatctataaccacctagaagacctgatagatgagaaaggtgtggaggatgaggaggat
ctttatgactgtgtctacgatgatgaagacggaggagagatctatgaagatctgatgaag
gctgaagcagtccctcctcctctgtgttagagacagaatatcaggagctgctgtctgaca
gagatcaagcagactgaggagaagtacacagagactctggactccatagagaagtatttt
atggcacctcttacgacattcctgtcctcggaggagatgaagaacgtgtttgtcaacatt
ccggacctggttaaagttcacaagagtctcatggtggagatccaagactctgtccaccat
aaaagtgctcagaacatctaccagatcttcatcaactacaaagagagattgctaatatat
gggaaatactgtagccatgtagaaacggccatcgttgctttggatgacatctgcaaacac
agagaggacatccgaatgaagctggaggaatgtgcgaagagagccaactatggaaagttt
acactgagggatctgctagttgtccctatgcagcgggtactgaagtatcaccttcttcta
caggaattagtgaaacacactcacgacgcggctgacaagagcaatttgcggctggcgctg
gatgccatgaaggacctggctcaatacgtcaatgaagtgaagagagacaacgagactctg
agagacatagcccagtatcagaaatccatcgaaaaccttaatcagtctcttagtacctat
gggagaccaaaaggagacggagaggtacgcgttacctcaatcgacaaacgtgccaaacag
gaccggcacatcttcctgttcgatgctgctgtgatcgtctgtaagaggagaggagacaac
tatgagatgaaggaggtgatcgacctgcaccacttcaagatcaccaacaaccccacgtca
gacaaggagaacaggaagtggtcctatgggttctacctgacacacaaccaggggcagagt
ggcttcgagttgttcttcaaaaccaaggagctgaagaagaaatggctggagcagtttggc
atggccatatccaacatacgtccagagaatggcaccagtaacctccatgagttcaagatg
cacaccttcgacagaatcacatcctgtagctactgccacatgctgctaaggggtatcttt
aaccaggggtacctgtgctccaagtgtggtgttggagcccataaggaatgtctggggagg
tttggcagctgtggaaaaacagattcgggctccttcagaactcaggtaaaatcagtgcaa
ggacggcgctcagatccagggttacctaagatgttggtgaccaggaactattttggcgtg
ccaagtcccatatgtggcccgcccctcaacatccagcaaggtgacatcatcgagctggtc
tgtgccgatctacacagctcctggtggcagggcaaaattctgacgacgagagaggtcggc
ttctttccaagtgacgccgtgaagccgtgtccatgtgtccccaaaccttgtcgactactc
cacacaccttgtgcctcctggactgtaggtttgctggcccatgagagacttcagctgagg
gcagagctgatcaacagagggaacagcaccactggtccgccaccgaccgcgagttcacag
agtacgccatcagcatcaaaagcagaacattacactcatctcttattcatggcccacagg
tacaacaatgacgtgaagcacatcaagatcctgaccagagatgcctgcttccacatcgca
gagaacaagaagttcaggagtatattagaactaattgagtactacaaacaccattcattg
agggaaggcttcagaagcctggacaccacactgcagttcccctacagagagcaggagaat
gctgctatgctccacaccaacagacctggaggaaacatgttcacccctaaggtgatgggt
atggcgatagcccgctatgacttcagctccagggacaccagagagctgtctctacaggag
ggagacatagtcaagatctacaccaagtcaggagccaatggctggtggaggggagaggtc
agcggcagggtgggctggtttccatctacctatgtggaagaaggagaggagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein domain (18)   
   Pfam (18)   
All databases (20)   

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